Understanding the Structure and Dynamics of Complex Biomembrane Interactions by Neutron Scattering Techniques

Shuo Qian, Veerendra Kumar Sharma, Luke A. Clifton

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43 Scopus citations

Abstract

The membrane is one of the key structural materials of biology at the cellular level. Composed predominantly of a bilayer of lipids with embedded and bound proteins, it defines the boundaries of the cell and many organelles essential to life and therefore is involved in almost all biological processes. Membrane-specific interactions, such as drug binding to a membrane receptor or the interactions of an antimicrobial compound with the lipid matrix of a pathogen membrane, are of interest across the scientific disciplines. Herein we present a review, aimed at nonexperts, of the major neutron scattering techniques used in membrane studies: Small-angle neutron scattering, neutron membrane diffraction, neutron reflectometry, quasielastic neutron scattering, and neutron spin echo. Neutron scattering techniques are well suited to studying biological membranes. The nondestructive nature of cold neutrons means that samples can be measured for long periods without fear of beam damage from ultraviolet, electron, or X-ray radiation, and neutron beams are highly penetrating, thus offering flexibility in samples and sample environments. Most important is the strong difference in neutron scattering lengths between the two most abundant forms of hydrogen, protium and deuterium. Changing the relative amounts of protium/deuterium in a sample allows the production of a series of neutron scattering data sets, enabling the observation of differing components within complex membrane architectures. This approach can be as simple as using the naturally occurring neutron contrast between different biomolecules to study components in a complex by changing the solution H2O/D2O ratio or as complex as selectively labeling individual components with hydrogen isotopes. This review presents an overview of each experimental technique with the neutron instrument configuration, related sample preparation and sample environment, and data analysis, highlighted by a special emphasis on using prominent neutron contrast to understand structure and dynamics. This review gives researchers a practical introduction to the often enigmatic suite of neutron beamlines, thereby lowering the barrier to taking advantage of these large-facility techniques to achieve new understandings of membranes and their interactions with other molecules.

Original languageEnglish
Pages (from-to)15189-15211
Number of pages23
JournalLangmuir
Volume36
Issue number50
DOIs
StatePublished - Dec 22 2020

Funding

S.Q. thanks Professor Huey W. Huang and Drs. William Heller and Hugh O’Neil for helpful advice and discussions. S.Q. was supported by the U.S. Department of Energy (DOE) Office of Biological and Environmental Research through the Center for Structural Molecular Biology and the Laboratory Directed Research and Development Program at ORNL. The High Flux Isotope Reactor and SNS, where some data were acquired, are supported by the DOE Office of Science, Scientific User Facility Division. V.K.S. acknowledges Dr. R. Mukhopadhyay, Dr. S. Mitra, and Mr. H. Srinivasan, Solid State Physics Division, Bhabha Atomic Research Centre, India, for fruitful discussions. L.A.C. thanks Dr. Maximillian Skoda, Dr. Andrew McCluskey, Dr. Tom Arnold, Professor Jeremy Lakey and Dr. John Webster for helpful advice and discussions and Professor Frank Heinrich and the National Institute of Standards and Technology Nano- fabrication Facility for the metal underlayer coatings used for the floating bacterial membrane sample in Figure 8. We thank Jill Hemman for the preparation of numerous images. This manuscript has been authored by UT-Battelle LLC under contract no. DE-AC05-00OR22725 with the U.S. Department of Energy (DOE). The U.S. government retains and the publisher, by accepting the article for publication, acknowledges that the U.S. government retains a nonexclusive, paid-up, irrevocable, worldwide license to publish or reproduce the published form of this manuscript, or allow others to do so, for U.S. government purposes. The DOE will provide public access to these results of federally sponsored research in accordance with the DOE Public Access Plan ( http://energy.gov/downloads/doe-public-access-plan ).

FundersFunder number
U.S. Department of Energy
Office of Science
Biological and Environmental Research
Oak Ridge National Laboratory
Laboratory Directed Research and Development
UT-BattelleDE-AC05-00OR22725

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