The National Microbiome Data Collaborative: enabling microbiome science

Elisha M. Wood-Charlson; Anubhav; Deanna Auberry; Hannah Blanco; Mark I. Borkum; Yuri E. Corilo; Karen W. Davenport; Shweta Deshpande; Ranjeet Devarakonda; Meghan Drake; William D. Duncan; Mark C. Flynn; David Hays; Bin Hu; Marcel Huntemann; Po E. Li; Mary Lipton; Chien Chi Lo; David Millard; Kayd Miller; Paul D. Piehowski; Samuel Purvine; T. B.K. Reddy; Migun Shakya; Jagadish Chandrabose Sundaramurthi; Pajau Vangay; Yaxing Wei; Bruce E. Wilson; Shane Canon; Patrick S.G. Chain; Kjiersten Fagnan; Stanton Martin; Lee Ann McCue; Christopher J. Mungall; Nigel J. Mouncey; Mary E. Maxon; Emiley A. Eloe-Fadrosh

doi:10.1038/s41579-020-0377-0

The National Microbiome Data Collaborative: enabling microbiome science

Elisha M. Wood-Charlson, Anubhav, Deanna Auberry, Hannah Blanco, Mark I. Borkum, Yuri E. Corilo, Karen W. Davenport, Shweta Deshpande, Ranjeet Devarakonda, Meghan Drake, William D. Duncan, Mark C. Flynn, David Hays, Bin Hu, Marcel Huntemann, Po E. Li, Mary Lipton, Chien Chi Lo, David Millard, Kayd MillerPaul D. Piehowski, Samuel Purvine, T. B.K. Reddy, Migun Shakya, Jagadish Chandrabose Sundaramurthi, Pajau Vangay, Yaxing Wei, Bruce E. Wilson, Shane Canon, Patrick S.G. Chain, Kjiersten Fagnan, Stanton Martin, Lee Ann McCue, Christopher J. Mungall, Nigel J. Mouncey, Mary E. Maxon, Emiley A. Eloe-Fadrosh

Research output: Contribution to journal › Comment/debate

40 Scopus citations

Original language	English
Pages (from-to)	313-314
Number of pages	2
Journal	Nature Reviews Microbiology
Volume	18
Issue number	6
DOIs	https://doi.org/10.1038/s41579-020-0377-0
State	Published - Jun 1 2020

Funding

In June 2019, the National Microbiome Data Collaborative (NMDC) was launched at the American Society for Microbiology conference as a pilot initiative funded by the Department of Energy’s (DOE) Office of Science, Biological and Environmental Research programme. The NMDC seeks to address fundamental roadblocks in microbiome data science and gaps in transdisciplinary collaboration. Presented here are the two strategic priorities — infrastructure and engagement — for the NMDC and future activities to support the long-term vision.

Funders	Funder number
Biological and Environmental Research programme
Department of Energy’s
Office of Science

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Wood-Charlson, E. M., Anubhav, Auberry, D., Blanco, H., Borkum, M. I., Corilo, Y. E., Davenport, K. W., Deshpande, S., Devarakonda, R., Drake, M., Duncan, W. D., Flynn, M. C., Hays, D., Hu, B., Huntemann, M., Li, P. E., Lipton, M., Lo, C. C., Millard, D., ... Eloe-Fadrosh, E. A. (2020). The National Microbiome Data Collaborative: enabling microbiome science. Nature Reviews Microbiology, 18(6), 313-314. https://doi.org/10.1038/s41579-020-0377-0

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title = "The National Microbiome Data Collaborative: enabling microbiome science",

author = "Wood-Charlson, {Elisha M.} and Anubhav and Deanna Auberry and Hannah Blanco and Borkum, {Mark I.} and Corilo, {Yuri E.} and Davenport, {Karen W.} and Shweta Deshpande and Ranjeet Devarakonda and Meghan Drake and Duncan, {William D.} and Flynn, {Mark C.} and David Hays and Bin Hu and Marcel Huntemann and Li, {Po E.} and Mary Lipton and Lo, {Chien Chi} and David Millard and Kayd Miller and Piehowski, {Paul D.} and Samuel Purvine and Reddy, {T. B.K.} and Migun Shakya and Sundaramurthi, {Jagadish Chandrabose} and Pajau Vangay and Yaxing Wei and Wilson, {Bruce E.} and Shane Canon and Chain, {Patrick S.G.} and Kjiersten Fagnan and Stanton Martin and McCue, {Lee Ann} and Mungall, {Christopher J.} and Mouncey, {Nigel J.} and Maxon, {Mary E.} and Eloe-Fadrosh, {Emiley A.}",

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doi = "10.1038/s41579-020-0377-0",

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journal = "Nature Reviews Microbiology",

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Wood-Charlson, EM, Anubhav, Auberry, D, Blanco, H, Borkum, MI, Corilo, YE, Davenport, KW, Deshpande, S, Devarakonda, R, Drake, M, Duncan, WD, Flynn, MC, Hays, D, Hu, B, Huntemann, M, Li, PE, Lipton, M, Lo, CC, Millard, D, Miller, K, Piehowski, PD, Purvine, S, Reddy, TBK, Shakya, M, Sundaramurthi, JC, Vangay, P, Wei, Y, Wilson, BE, Canon, S, Chain, PSG, Fagnan, K, Martin, S, McCue, LA, Mungall, CJ, Mouncey, NJ, Maxon, ME & Eloe-Fadrosh, EA 2020, 'The National Microbiome Data Collaborative: enabling microbiome science', Nature Reviews Microbiology, vol. 18, no. 6, pp. 313-314. https://doi.org/10.1038/s41579-020-0377-0

TY - JOUR

T1 - The National Microbiome Data Collaborative

T2 - enabling microbiome science

AU - Wood-Charlson, Elisha M.

AU - Anubhav,

AU - Auberry, Deanna

AU - Blanco, Hannah

AU - Borkum, Mark I.

AU - Corilo, Yuri E.

AU - Davenport, Karen W.

AU - Deshpande, Shweta

AU - Devarakonda, Ranjeet

AU - Drake, Meghan

AU - Duncan, William D.

AU - Flynn, Mark C.

AU - Hays, David

AU - Hu, Bin

AU - Huntemann, Marcel

AU - Li, Po E.

AU - Lipton, Mary

AU - Lo, Chien Chi

AU - Millard, David

AU - Miller, Kayd

AU - Piehowski, Paul D.

AU - Purvine, Samuel

AU - Reddy, T. B.K.

AU - Shakya, Migun

AU - Sundaramurthi, Jagadish Chandrabose

AU - Vangay, Pajau

AU - Wei, Yaxing

AU - Wilson, Bruce E.

AU - Canon, Shane

AU - Chain, Patrick S.G.

AU - Fagnan, Kjiersten

AU - Martin, Stanton

AU - McCue, Lee Ann

AU - Mungall, Christopher J.

AU - Mouncey, Nigel J.

AU - Maxon, Mary E.

AU - Eloe-Fadrosh, Emiley A.

PY - 2020/6/1

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U2 - 10.1038/s41579-020-0377-0

DO - 10.1038/s41579-020-0377-0

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SN - 1740-1526

VL - 18

SP - 313

EP - 314

JO - Nature Reviews Microbiology

JF - Nature Reviews Microbiology

IS - 6

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The National Microbiome Data Collaborative: enabling microbiome science

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