Abstract
Lipid nanoparticles (LNPs) are being intensively researched and developed to leverage their ability to safely and effectively deliver therapeutics. To achieve optimal therapeutic delivery, a comprehensive understanding of the relationship between formulation, structure, and efficacy is critical. However, the vast chemical space involved in the production of LNPs and the resulting structural complexity make the structure to function relationship challenging to assess and predict. New components and formulation procedures, which provide new opportunities for the use of LNPs, would be best identified and optimized using high-throughput characterization methods. Recently, a high-throughput workflow, consisting of automated mixing, small-angle X-ray scattering (SAXS), and cellular assays, demonstrated a link between formulation, internal structure, and efficacy for a library of LNPs. As SAXS data can be rapidly collected, the stage is set for the collection of thousands of SAXS profiles from a myriad of LNP formulations. In addition, correlated LNP small-angle neutron scattering (SANS) datasets, where components are systematically deuterated for additional contrast inside, provide complementary structural information. The centralization of SAXS and SANS datasets from LNPs, with appropriate, standardized metadata describing formulation parameters, into a data repository will provide valuable guidance for the formulation of LNPs with desired properties. To this end, we introduce Simple Scattering, an easy-to-use, open data repository for storing and sharing groups of correlated scattering profiles obtained from LNP screening experiments. Here, we discuss the current state of the repository, including limitations and upcoming changes, and our vision towards future usage in developing our collective knowledge base of LNPs.
| Original language | English |
|---|---|
| Article number | 1321364 |
| Journal | Frontiers in Molecular Biosciences |
| Volume | 11 |
| DOIs | |
| State | Published - 2024 |
Funding
The author(s) declare that financial support was received for the research, authorship, and/or publication of this article. This work is funded by the following: National Institute of Health through ALS-ENABLE (P30 GM124169), National Institute of General Medical Sciences (NIGMS), Department of Energy through Biopreparedness Research Virtual Environment (BRaVE) Initiative, Advanced Scientific Computing Research (ASCR) program, and Basic Energy Science grant DE-AC02-05CH11231. The authors acknowledge Chunwan Yen, Yuchen Fan, and Sarah Poon for insightful discussion. Simple Scattering is managed by the SIBYLS Advanced Light Source beamline, and GLH and LK acknowledge support from the following sources: National Institutes of Health grant ALS-ENABLE (P30 GM124169), National Cancer Institute grant SBDR (CA92584), Department of Energy through Basic Energy Science grant DE-AC02-05CH11231 and Biological Environmental Research grant IDAT. HO’N and WL acknowledge the Center for Structural Molecular Biology (FWP ERKP291) that supports the Bio-SANS instrument funded by the Office of Biological and Environmental Research (OBER), U. S. Department of Energy (DOE).
Keywords
- SAS
- database
- lipid nanoparticles
- small-angle scattering
- structure-activity relationship
- vaccines
- web application
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