Scalable FBP decomposition for cone-beam CT reconstruction

  • Peng Chen
  • , Mohamed Wahib
  • , Xiao Wang
  • , Takahiro Hirofuchi
  • , Hirotaka Ogawa
  • , Ander Biguri
  • , Richard Boardman
  • , Thomas Blumensath
  • , Satoshi Matsuoka

Research output: Chapter in Book/Report/Conference proceedingConference contributionpeer-review

6 Scopus citations

Abstract

Filtered Back-Projection (FBP) is a fundamental compute intense algorithm used in tomographic image reconstruction. Cone-Beam Computed Tomography (CBCT) devices use a cone-shaped X-ray beam, in comparison to the parallel beam used in older CT generations. Distributed image reconstruction of cone-beam datasets typically relies on dividing batches of images into different nodes. This simple input decomposition, however, introduces limits on input/output sizes and scalability. We propose a novel decomposition scheme and reconstruction algorithm for distributed FPB. This scheme enables arbitrarily large input/output sizes, eliminates the redundancy arising in the endto-end pipeline and improves the scalability by replacing two communication collectives with only one segmented reduction. Finally, we implement the proposed decomposition scheme in a framework that is useful for all current-generation CT devices (7??? gen). In our experiments using up to 1024 GPUs, our framework can construct 40963 volumes, for real-world datasets, in under 16 seconds (including I/O).

Original languageEnglish
Title of host publicationProceedings of SC 2021
Subtitle of host publicationThe International Conference for High Performance Computing, Networking, Storage and Analysis: Science and Beyond
PublisherIEEE Computer Society
ISBN (Electronic)9781450384421
DOIs
StatePublished - Nov 14 2021
Externally publishedYes
Event33rd International Conference for High Performance Computing, Networking, Storage and Analysis: Science and Beyond, SC 2021 - Virtual, Online, United States
Duration: Nov 14 2021Nov 19 2021

Publication series

NameInternational Conference for High Performance Computing, Networking, Storage and Analysis, SC
ISSN (Print)2167-4329
ISSN (Electronic)2167-4337

Conference

Conference33rd International Conference for High Performance Computing, Networking, Storage and Analysis: Science and Beyond, SC 2021
Country/TerritoryUnited States
CityVirtual, Online
Period11/14/2111/19/21

Funding

This work was supported by JSPS KAKENHI under Grant Number JP21K17750. This paper is based on results obtained from a project, JPNP20006, commissioned by the New Energy and Industrial Technology Development Organization (NEDO). This research was partially supported by EPSRC grant EP/R002495/1 and EURAMET grant 17IND08. This work was partially supported by JST-CREST under Grant Number JPMJCR19F5; JST, PRESTO Grant Number JPMJPR20MA, Japan. We would like to thank Endo Lab at Tokyo Institute of Technology for providing computing resources. The author wishes to acknowledge useful discussions with Prof. Qinyou Hu at SMU and Dr. Jintao Meng at CAS.

Keywords

  • FBP
  • GPU
  • HPC
  • Image Reconstruction

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