Rock climbing: A local-global algorithm to compute minimum energy and minimum free energy pathways

Clark Templeton, Szu Hua Chen, Arman Fathizadeh, Ron Elber

Research output: Contribution to journalArticlepeer-review

9 Scopus citations

Abstract

The calculation of minimum energy or minimum free energy paths is an important step in the quantitative and qualitative studies of chemical and physical processes. The computations of these coordinates present a significant challenge and have attracted considerable theoretical and computational interest. Here we present a new local-global approach to study reaction coordinates, based on a gradual optimization of an action. Like other global algorithms, it provides a path between known reactants and products, but it uses a local algorithm to extend the current path in small steps. The local-global approach does not require an initial guess to the path, a major challenge for global pathway finders. Finally, it provides an exact answer (the steepest descent path) at the end of the calculations. Numerical examples are provided for the Mueller potential and for a conformational transition in a solvated ring system.

Original languageEnglish
Article number152718
JournalJournal of Chemical Physics
Volume147
Issue number15
DOIs
StatePublished - Oct 21 2017
Externally publishedYes

Funding

This research was supported by a Welch Grant No. F-1896 and NIH Grant Nos. GM059796, GM085062, and GM113644 to Ron Elber.

FundersFunder number
National Institutes of HealthGM113644, GM059796
National Institute of General Medical SciencesR01GM085062

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