Revealing the Chemical Bonding in Adatom Arrays via Machine Learning of Hyperspectral Scanning Tunneling Spectroscopy Data

Kevin M. Roccapriore, Qiang Zou, Lizhi Zhang, Rui Xue, Jiaqiang Yan, Maxim Ziatdinov, Mingming Fu, David G. Mandrus, Mina Yoon, Bobby G. Sumpter, Zheng Gai, Sergei V. Kalinin

Research output: Contribution to journalArticlepeer-review

16 Scopus citations

Abstract

The adatom arrays on surfaces offer an ideal playground to explore the mechanisms of chemical bonding via changes in the local electronic tunneling spectra. While this information is readily available in hyperspectral scanning tunneling spectroscopy data, its analysis has been considerably impeded by a lack of suitable analytical tools. Here we develop a machine learning based workflow combining supervised feature identification in the spatial domain and unsupervised clustering in the energy domain to reveal the details of structure-dependent changes of the electronic structure in adatom arrays on the Co3Sn2S2 cleaved surface. This approach, in combination with first-principles calculations, provides insight for using artificial neural networks to detect adatoms and classifies each based on their local neighborhood comprised of other adatoms. These structurally classified adatoms are further spectrally deconvolved. The unexpected inhomogeneity of electronic structures among adatoms in similar configurations is unveiled using this method, suggesting there is not a single atomic species of adatoms, but rather multiple types of adatoms on the Co3Sn2S2 surface. This is further supported by a slight contrast difference in the images (or slight size variation) of the topography of the adatoms.

Original languageEnglish
Pages (from-to)11806-11816
Number of pages11
JournalACS Nano
Volume15
Issue number7
DOIs
StatePublished - Jul 27 2021

Funding

This effort (feature extraction, machine learning, and first-principles modeling) is based upon work supported by the U.S. Department of Energy (DOE), Office of Science, Basic Energy Sciences (BES), Materials Sciences and Engineering Division (K.M.R., S.V.K., M.Y.). Scanning tunneling microscopy (Z.G.), STM simulations (M.Y.), and machine learning (M.Z.) were conducted at the Center for Nanophase Materials Sciences (CNMS), a U.S. Department of Energy Office of Science User Facility. (R.X.) and (D.G.M.) acknowledge support from the Gordon and Betty Moore Foundation’s EPiQS Initiative, Grant GBMF9069. This research used resources of the Oak Ridge Leadership Computing Facility and the National Energy Research Scientific Computing Center, DOE Office of Science User Facilities.

FundersFunder number
U.S. Department of Energy
Gordon and Betty Moore FoundationGBMF9069
Office of Science
Basic Energy Sciences
Division of Materials Sciences and Engineering
National Energy Research Scientific Computing Center

    Keywords

    • adatoms
    • machine learning
    • scanning probe microscopy
    • scanning tunneling spectroscopy
    • topological insulator

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