Pairing a Global Optimization Algorithm with EXAFS to Characterize Lanthanide Structure in Solution

Thomas J. Summers, Difan Zhang, Josiane A. Sobrinho, Ana de Bettencourt-Dias, Roger Rousseau, Vassiliki Alexandra Glezakou, David C. Cantu

Research output: Contribution to journalArticlepeer-review

Abstract

Ensemble-average sampling of structures from ab initio molecular dynamics (AIMD) simulations can be used to predict theoretical extended X-ray absorption fine structure (EXAFS) signals that closely match experimental spectra. However, AIMD simulations are time-consuming and resource-intensive, particularly for solvated lanthanide ions, which often form multiple nonrigid geometries with high coordination numbers. To accelerate the characterization of lanthanide structures in solution, we employed the Northwest Potential Energy Surface Search Engine (NWPEsSe), an adaptive-learning global optimization algorithm, to efficiently screen first-shell structures. As case studies, we examine two systems: Eu(NO3)3 dissolved in acetonitrile with a terpyridine ligand (terpyNO2), and Nd(NO3)3 dissolved in acetonitrile. The theoretical spectra for structures identified by NWPEsSe were compared to both experimental and AIMD-derived EXAFS spectra. The NWPEsSe algorithm successfully identified the proper solvation structure for both Eu(NO3)3(terpyNO2) and Nd(NO3)(acetonitrile)3, with the calculated EXAFS signals closely matching the experimental spectra for the Eu-ligand complex and showing good similarity for the Nd salt; the better agreement with the ligand-containing structure is attributed to a less dynamic coordination environment due to the rigid ligand. The key advantage of the global optimization algorithm lies in its ability to sample the coordination environment across the potential energy surface and reduce the time required to identify structures from generally a month to within a week. Additionally, this approach is versatile and can be adapted to characterize main-group metal complexes.

Original languageEnglish
Pages (from-to)8926-8936
Number of pages11
JournalJournal of Chemical Information and Modeling
Volume64
Issue number23
DOIs
StatePublished - Dec 9 2024

Funding

The authors thank Dr. Shelly Kelly (Beamline Scientist, Advanced Photon Source at Argonne National Laboratory) for support with the EXAFS measurements. This material is based on work supported by the U.S. Department of Energy (DOE), Office of Basic Energy Sciences under Award DE-SC0022178. D.Z. acknowledges the U.S. Department of Energy (DOE), Office of Science, Basic Energy Sciences, Chemical Sciences, Geosciences, and Biosciences Division, Harnessing Confinement Effects, Stimuli, and Reactive Intermediates in Separations, FWP 81462. V.-A.G. acknowledges support by the Laboratory Directed Research and Development (LDRD) Program of Oak Ridge National Laboratory, managed by UT-Battelle, LLC, for the US Department of Energy under contract no. DE-AC05-00OR22725 with the U.S. Department of Energy. This research used resources of the Advanced Photon Source, a U.S. Department of Energy (DOE) Office of Science user facility operated for the DOE Office of Science by Argonne National Laboratory under Contract No. DE-AC02-06CH11357. This research used resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy Office of Science User Facility using NERSC award BES-ERCAP0021496 and BES-ERCAP0023505.

FundersFunder number
Oak Ridge National Laboratory
Laboratory Directed Research and Development
Chemical Sciences, Geosciences, and Biosciences Division
U.S. Department of EnergyDE-AC05-00OR22725
Basic Energy SciencesDE-SC0022178
Office of ScienceBES-ERCAP0023505, BES-ERCAP0021496
Harnessing Confinement EffectsFWP 81462
Argonne National LaboratoryDE-AC02-06CH11357

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