Network metamodeling: Effect of correlation metric choice on phylogenomic and transcriptomic network topology

Deborah A. Weighill, Daniel Jacobson

Research output: Chapter in Book/Report/Conference proceedingChapterpeer-review

5 Scopus citations

Abstract

We explore the use of a network meta-modeling approach to compare the effects of similarity metrics used to construct biological networks on the topology of the resulting networks. This work reviews various similarity metrics for the construction of networks and various topology measures for the characterization of resulting network topology, demonstrating the use of these metrics in the construction and comparison of phylogenomic and transcriptomic networks.

Original languageEnglish
Title of host publicationAdvances in Biochemical Engineering/Biotechnology
PublisherSpringer Science and Business Media Deutschland GmbH
Pages143-183
Number of pages41
DOIs
StatePublished - 2017

Publication series

NameAdvances in Biochemical Engineering/Biotechnology
Volume160
ISSN (Print)0724-6145

Keywords

  • Network comparison
  • Network topology
  • Similarity metrics

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