TY - GEN
T1 - Multi-physics simulations of particle tracking in arterial geometries with a scalable moving window algorithm
AU - Herschlag, Gregory
AU - Gounley, John
AU - Roychowdhury, Sayan
AU - Draeger, Erik W.
AU - Randles, Amanda
N1 - Publisher Copyright:
© 2019 IEEE.
PY - 2019/9
Y1 - 2019/9
N2 - In arterial systems, cancer cell trajectories determine metastatic cancer locations; similarly, particle trajectories determine drug delivery distribution. Predicting trajectories is challenging, as the dynamics are affected by local interactions with red blood cells, complex hemodynamic flow structure, and downstream factors such as stenoses or blockages. Direct simulation is not possible, as a single simulation of a large arterial domain with explicit red blood cells is currently intractable on even the largest supercomputers. To overcome this limitation, we present a multi-physics adaptive window algorithm, in which individual red blood cells are explicitly modeled in a small region of interest moving through a coupled arterial fluid domain. We describe the coupling between the window and fluid domains, including automatic insertion and deletion of explicit cells and dynamic tracking of cells of interest by the window. We show that this algorithm scales efficiently on heterogeneous architectures and enables us to perform large, highly-resolved particle-tracking simulations that would otherwise be intractable.
AB - In arterial systems, cancer cell trajectories determine metastatic cancer locations; similarly, particle trajectories determine drug delivery distribution. Predicting trajectories is challenging, as the dynamics are affected by local interactions with red blood cells, complex hemodynamic flow structure, and downstream factors such as stenoses or blockages. Direct simulation is not possible, as a single simulation of a large arterial domain with explicit red blood cells is currently intractable on even the largest supercomputers. To overcome this limitation, we present a multi-physics adaptive window algorithm, in which individual red blood cells are explicitly modeled in a small region of interest moving through a coupled arterial fluid domain. We describe the coupling between the window and fluid domains, including automatic insertion and deletion of explicit cells and dynamic tracking of cells of interest by the window. We show that this algorithm scales efficiently on heterogeneous architectures and enables us to perform large, highly-resolved particle-tracking simulations that would otherwise be intractable.
KW - Cellular trajectory
KW - Heterogeneous computing
KW - Immersed Boundary
KW - Lattice Boltzmann
UR - http://www.scopus.com/inward/record.url?scp=85075270301&partnerID=8YFLogxK
U2 - 10.1109/CLUSTER.2019.8891041
DO - 10.1109/CLUSTER.2019.8891041
M3 - Conference contribution
AN - SCOPUS:85075270301
T3 - Proceedings - IEEE International Conference on Cluster Computing, ICCC
BT - Proceedings - 2019 IEEE International Conference on Cluster Computing, CLUSTER 2019
PB - Institute of Electrical and Electronics Engineers Inc.
T2 - 2019 IEEE International Conference on Cluster Computing, CLUSTER 2019
Y2 - 23 September 2019 through 26 September 2019
ER -