Modeling Dilute Solutions Using First-Principles Molecular Dynamics: Computing more than a Million Atoms with over a Million Cores

Jean Luc Fattebert, Daniel Osei-Kuffuor, Erik W. Draeger, Tadashi Ogitsu, William D. Krauss

Research output: Chapter in Book/Report/Conference proceedingConference contributionpeer-review

21 Scopus citations

Abstract

First-Principles Molecular Dynamics (FPMD) methods, although powerful, are notoriously expensive computationally due to the quantum modeling of electrons. Traditional FPMD approaches have typically been limited to a few thousand atoms at most, due to O(N3) or worse solver complexity and the large amount of communication required for highly parallel implementations. Attempts to lower the complexity have often introduced uncontrolled approximations or systematic errors. Using a robust new algorithm, we have developed an O(N) complexity solver for electronic structure problems with fully controllable numerical error. Its minimal use of global communications yields excellent scalability, allowing for very accurate FPMD simulations of more than a million atoms on over a million cores. At these scales, this approach provides multiple orders of magnitude speedup compared to the standard plane-wave approach typically used in condensed matter applications, without sacrificing accuracy. This will open up entire new classes of FPMD simulations, e.g. dilute aqueous solutions.

Original languageEnglish
Title of host publicationProceedings of SC 2016
Subtitle of host publicationThe International Conference for High Performance Computing, Networking, Storage and Analysis
PublisherIEEE Computer Society
Pages12-22
Number of pages11
ISBN (Electronic)9781467388153
DOIs
StatePublished - Jul 2 2016
Externally publishedYes
Event2016 International Conference for High Performance Computing, Networking, Storage and Analysis, SC 2016 - Salt Lake City, United States
Duration: Nov 13 2016Nov 18 2016

Publication series

NameInternational Conference for High Performance Computing, Networking, Storage and Analysis, SC
Volume0
ISSN (Print)2167-4329
ISSN (Electronic)2167-4337

Conference

Conference2016 International Conference for High Performance Computing, Networking, Storage and Analysis, SC 2016
Country/TerritoryUnited States
CitySalt Lake City
Period11/13/1611/18/16

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