Microbial dormancy promotes microbial biomass and respiration across pulses of drying-wetting stress

Alejandro Salazar, Benjamin N. Sulman, Jeffrey S. Dukes

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48 Scopus citations

Abstract

Recent work suggests that metabolic activation and deactivation of microbes in soil strongly influences soil carbon (C) dynamics and climate feedbacks. However, few soil C models consider these transitions. We hypothesized that microbes’ capacity to enter and exit dormancy in response to unfavorable and favorable environmental conditions decreases the sensitivity of microbial biomass and cumulative respiration to environmental stress. To test this hypothesis, we collected data from a rewetting experiment and used it to design and parameterize dormancy in an existing microbe-based soil C model. Then we compared predictions of microbial biomass and soil heterotrophic respiration (RH) under simulated cycles of stressful (dryness) and favorable (wet pulses) conditions. Because the influence of moisture on microbial processes in soil generally depends on temperature, we collected data and tested predictions at different temperatures. When dormancy was not taken into account, simulated microbial biomass and cumulative microbial respiration over five years were lower and decreased faster under lengthening drying-wetting cycles. Differences due to dormancy increased with temperature and with the length of the dry periods between wetting events. We conclude that ignoring both the capacity of microbes to enter and exit dormancy in response to the environment and the consequences of these metabolic responses for soil C cycling results in predictions of unrealistically low RH under warming and drying-wetting cycles.

Original languageEnglish
Pages (from-to)237-244
Number of pages8
JournalSoil Biology and Biochemistry
Volume116
DOIs
StatePublished - Jan 2018
Externally publishedYes

Funding

A. Salazar acknowledges COLCIENCIAS (Departamento Administrativo de Ciencia Tecnología e Innovación en Colombia) and the Fulbright-Colombia program. B. Sulman was supported under award NA14OAR4320106 from the National Oceanic and Atmospheric Administration , U.S. Department of Commerce. The statements, findings, conclusions, and recommendations are those of the author(s) and do not necessarily reflect the views of the National Oceanic and Atmospheric Administration, or the U.S. Department of Commerce. J. Dukes acknowledges the Integrated Network for Terrestrial Ecosystem Research on Feedbacks to the Atmosphere and ClimatE (INTERFACE): Linking experimentalists, ecosystem modelers, and Earth system modelers (NSF: DEB-0955771). This is paper no. 1713 of the Purdue Climate Change Research Center (PCCRC).

FundersFunder number
U.S. Department of Commerce
National Oceanic and Atmospheric Administration
Departamento Administrativo de Ciencia, Tecnología e Innovación (COLCIENCIAS)NA14OAR4320106

    Keywords

    • Drying-wetting cycle
    • Microbial biomass
    • Microbial dormancy
    • Soil carbon model
    • Soil heterotrophic respiration

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