TY - GEN
T1 - Longitudinal Effects on Plant Species Involved in Agriculture and Pandemic Emergence Undergoing Changes in Abiotic Stress
AU - Cashman, Mikaela
AU - Vergara, Verónica G.Melesse
AU - Lagergren, John
AU - Lane, Matthew
AU - Merlet, Jean
AU - Atkinson, Mikaela
AU - Streich, Jared
AU - Bradburne, Christopher
AU - Plowright, Raina
AU - Joubert, Wayne
AU - Jacobson, Daniel
N1 - Publisher Copyright:
© 2023 ACM.
PY - 2023/6/26
Y1 - 2023/6/26
N2 - In this work we identify changes in high-resolution zones across the globe linked by environmental similarity that have implications for agriculture, bioenergy, and zoonosis. We refine exhaustive vector comparison methods with improved similarity metrics as well as provide multiple methods of amalgamation across 744 months of climatic data. The results of the vector comparison are captured as networks which are analyzed using static and longitudinal comparison methods to reveal locations around the globe experiencing dramatic changes in abiotic stress. Specifically we (i) incorporate updated similarity scores and provide a comparison between similarity metrics, (ii) implement a new feature for resource optimization, (iii) compare an agglomerative view to a longitudinal view, (iv) compare across 2-way and 3-way vector comparisons, (v) implement a new form of analysis, and (vi) demonstrate biological applications and discuss implications across a diverse set of species distributions by detecting changes that affect their habitats. Species of interest are related to agriculture (e.g., coffee, wine, chocolate), bioenergy (e.g., poplar, switchgrass, pennycress), as well as those living in zones of concern for zoonotic spillover that may lead to pandemics (e.g., eucalyptus, flying foxes).
AB - In this work we identify changes in high-resolution zones across the globe linked by environmental similarity that have implications for agriculture, bioenergy, and zoonosis. We refine exhaustive vector comparison methods with improved similarity metrics as well as provide multiple methods of amalgamation across 744 months of climatic data. The results of the vector comparison are captured as networks which are analyzed using static and longitudinal comparison methods to reveal locations around the globe experiencing dramatic changes in abiotic stress. Specifically we (i) incorporate updated similarity scores and provide a comparison between similarity metrics, (ii) implement a new feature for resource optimization, (iii) compare an agglomerative view to a longitudinal view, (iv) compare across 2-way and 3-way vector comparisons, (v) implement a new form of analysis, and (vi) demonstrate biological applications and discuss implications across a diverse set of species distributions by detecting changes that affect their habitats. Species of interest are related to agriculture (e.g., coffee, wine, chocolate), bioenergy (e.g., poplar, switchgrass, pennycress), as well as those living in zones of concern for zoonotic spillover that may lead to pandemics (e.g., eucalyptus, flying foxes).
KW - climate analysis
KW - high performance computing
UR - http://www.scopus.com/inward/record.url?scp=85166199052&partnerID=8YFLogxK
U2 - 10.1145/3592979.3593402
DO - 10.1145/3592979.3593402
M3 - Conference contribution
AN - SCOPUS:85166199052
T3 - Proceedings of the Platform for Advanced Scientific Computing Conference, PASC 2023
BT - Proceedings of the Platform for Advanced Scientific Computing Conference, PASC 2023
PB - Association for Computing Machinery, Inc
T2 - 2023 Platform for Advanced Scientific Computing Conference, PASC 2023
Y2 - 26 June 2023 through 28 June 2023
ER -