Fungal genome sequencing and bioenergy

Scott E. Baker; Jette Thykaer; William S. Adney; Thomas S. Brettin; Fred J. Brockman; Patrik D'haeseleer; A. Diego Martinez; R. Michael Miller; Daniel S. Rokhsar; Christopher W. Schadt; Tamas Torok; Gerald Tuskan; Joan Bennett; Randy M. Berka; Steven P. Briggs; Joseph Heitman; John Taylor; B. Gillian Turgeon; Margaret Werner-Washburne; Michael E. Himmel

doi:10.1016/j.fbr.2008.03.001

Fungal genome sequencing and bioenergy

Scott E. Baker, Jette Thykaer, William S. Adney, Thomas S. Brettin, Fred J. Brockman, Patrik D'haeseleer, A. Diego Martinez, R. Michael Miller, Daniel S. Rokhsar, Christopher W. Schadt, Tamas Torok, Gerald Tuskan, Joan Bennett, Randy M. Berka, Steven P. Briggs, Joseph Heitman, John Taylor, B. Gillian Turgeon, Margaret Werner-Washburne, Michael E. Himmel

Research output: Contribution to journal › Review article › peer-review

23 Scopus citations

Abstract

To date, the number of ongoing filamentous fungal genome sequencing projects is almost tenfold fewer than those of bacterial and archaeal genome projects. The fungi chosen for sequencing represent narrow kingdom diversity; most are pathogens or models. We advocate an ambitious, forward-looking phylogenetic-based genome sequencing program, designed to capture metabolic diversity within the fungal kingdom, thereby enhancing research into alternative bioenergy sources, bioremediation, and fungal-environment interactions.

Original language	English
Pages (from-to)	1-5
Number of pages	5
Journal	Fungal Biology Reviews
Volume	22
Issue number	1
DOIs	https://doi.org/10.1016/j.fbr.2008.03.001
State	Published - Feb 2008

Keywords

Bioenergy
Biofuel
Bioproduct
Fungal genomics

UN SDGs

This output contributes to the following UN Sustainable Development Goals (SDGs)

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10.1016/j.fbr.2008.03.001

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Baker, S. E., Thykaer, J., Adney, W. S., Brettin, T. S., Brockman, F. J., D'haeseleer, P., Martinez, A. D., Miller, R. M., Rokhsar, D. S., Schadt, C. W., Torok, T., Tuskan, G., Bennett, J., Berka, R. M., Briggs, S. P., Heitman, J., Taylor, J., Gillian Turgeon, B., Werner-Washburne, M., & Himmel, M. E. (2008). Fungal genome sequencing and bioenergy. Fungal Biology Reviews, 22(1), 1-5. https://doi.org/10.1016/j.fbr.2008.03.001

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title = "Fungal genome sequencing and bioenergy",

abstract = "To date, the number of ongoing filamentous fungal genome sequencing projects is almost tenfold fewer than those of bacterial and archaeal genome projects. The fungi chosen for sequencing represent narrow kingdom diversity; most are pathogens or models. We advocate an ambitious, forward-looking phylogenetic-based genome sequencing program, designed to capture metabolic diversity within the fungal kingdom, thereby enhancing research into alternative bioenergy sources, bioremediation, and fungal-environment interactions.",

keywords = "Bioenergy, Biofuel, Bioproduct, Fungal genomics",

author = "Baker, {Scott E.} and Jette Thykaer and Adney, {William S.} and Brettin, {Thomas S.} and Brockman, {Fred J.} and Patrik D'haeseleer and Martinez, {A. Diego} and Miller, {R. Michael} and Rokhsar, {Daniel S.} and Schadt, {Christopher W.} and Tamas Torok and Gerald Tuskan and Joan Bennett and Berka, {Randy M.} and Briggs, {Steven P.} and Joseph Heitman and John Taylor and {Gillian Turgeon}, B. and Margaret Werner-Washburne and Himmel, {Michael E.}",

year = "2008",

month = feb,

doi = "10.1016/j.fbr.2008.03.001",

language = "English",

volume = "22",

pages = "1--5",

journal = "Fungal Biology Reviews",

issn = "1749-4613",

publisher = "Elsevier",

number = "1",

}

Baker, SE, Thykaer, J, Adney, WS, Brettin, TS, Brockman, FJ, D'haeseleer, P, Martinez, AD, Miller, RM, Rokhsar, DS, Schadt, CW, Torok, T, Tuskan, G, Bennett, J, Berka, RM, Briggs, SP, Heitman, J, Taylor, J, Gillian Turgeon, B, Werner-Washburne, M & Himmel, ME 2008, 'Fungal genome sequencing and bioenergy', Fungal Biology Reviews, vol. 22, no. 1, pp. 1-5. https://doi.org/10.1016/j.fbr.2008.03.001

TY - JOUR

T1 - Fungal genome sequencing and bioenergy

AU - Baker, Scott E.

AU - Thykaer, Jette

AU - Adney, William S.

AU - Brettin, Thomas S.

AU - Brockman, Fred J.

AU - D'haeseleer, Patrik

AU - Martinez, A. Diego

AU - Miller, R. Michael

AU - Rokhsar, Daniel S.

AU - Schadt, Christopher W.

AU - Torok, Tamas

AU - Tuskan, Gerald

AU - Bennett, Joan

AU - Berka, Randy M.

AU - Briggs, Steven P.

AU - Heitman, Joseph

AU - Taylor, John

AU - Gillian Turgeon, B.

AU - Werner-Washburne, Margaret

AU - Himmel, Michael E.

PY - 2008/2

Y1 - 2008/2

N2 - To date, the number of ongoing filamentous fungal genome sequencing projects is almost tenfold fewer than those of bacterial and archaeal genome projects. The fungi chosen for sequencing represent narrow kingdom diversity; most are pathogens or models. We advocate an ambitious, forward-looking phylogenetic-based genome sequencing program, designed to capture metabolic diversity within the fungal kingdom, thereby enhancing research into alternative bioenergy sources, bioremediation, and fungal-environment interactions.

AB - To date, the number of ongoing filamentous fungal genome sequencing projects is almost tenfold fewer than those of bacterial and archaeal genome projects. The fungi chosen for sequencing represent narrow kingdom diversity; most are pathogens or models. We advocate an ambitious, forward-looking phylogenetic-based genome sequencing program, designed to capture metabolic diversity within the fungal kingdom, thereby enhancing research into alternative bioenergy sources, bioremediation, and fungal-environment interactions.

KW - Bioenergy

KW - Biofuel

KW - Bioproduct

KW - Fungal genomics

UR - http://www.scopus.com/inward/record.url?scp=44449103796&partnerID=8YFLogxK

U2 - 10.1016/j.fbr.2008.03.001

DO - 10.1016/j.fbr.2008.03.001

M3 - Review article

AN - SCOPUS:44449103796

SN - 1749-4613

VL - 22

SP - 1

EP - 5

JO - Fungal Biology Reviews

JF - Fungal Biology Reviews

IS - 1

ER -

Fungal genome sequencing and bioenergy

Abstract

Keywords

UN SDGs

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