Efficient purging of deleteriousmutations in plants with haploid selfing

Péter Szövényi, Nicolas Devos, David J. Weston, Xiaohan Yang, Zsófia Hock, Jonathan A. Shaw, Kentaro K. Shimizu, Stuart F. McDaniel, Andreas Wagner

Research output: Contribution to journalArticlepeer-review

30 Scopus citations

Abstract

In diploid organisms, selfing reduces the efficiency of selection in removing deleterious mutations from a population. This need not be the case for all organisms. Some plants, for example, undergo an extreme form of selfing known as intragametophytic selfing, which immediately exposes all recessive deleterious mutations in a parental genome to selective purging. Here, we ask how effectively deleteriousmutations are removed from such plants. Specifically, we study the extent to which deleteriousmutations accumulate in a predominantly selfing and a predominantly out crossing pair of moss species, using genome-wide transcriptome data. We find that the selfing species purge significantly more nonsynonymous mutations, as well as a greater proportion of radical amino acid changes which alter physicochemical properties of amino acids. Moreover, their purging of deleterious mutation is especially strong in conserved regions of protein-coding genes. Our observations show that selfing need not impede but can even accelerate the removal of deleterious mutations, and do so on a genome-wide scale.

Original languageEnglish
Pages (from-to)1238-1252
Number of pages15
JournalGenome Biology and Evolution
Volume6
Issue number5
DOIs
StatePublished - May 2014

Funding

FundersFunder number
National Science Foundation
Swiss National Science Foundation315230-129708
Swiss National Science Foundation
Directorate for Biological Sciences0918998
Directorate for Biological Sciences
Schweizerischer Nationalfonds zur Förderung der Wissenschaftlichen Forschung146137, 131726
Schweizerischer Nationalfonds zur Förderung der Wissenschaftlichen Forschung

    Keywords

    • Deleterious mutations
    • Diploid
    • Haploid
    • Haploid-dominant life cycle
    • High throughput sequencing
    • Intragametophytic selfing
    • Outcrossing

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