Draft Metagenome Sequences of the Sphagnum (Peat Moss) Microbiome from Ambient and Warmed Environments across Europe

Bryan T. Piatkowski; Dana L. Carper; Alyssa A. Carrell; I. Min A. Chen; Alicia Clum; Chris Daum; Emiley A. Eloe-Fadrosh; Daniel Gilbert; Gustaf Granath; Marcel Huntemann; Sara S. Jawdy; Ingeborg Jenneken Klarenberg; Joel E. Kostka; Nikos C. Kyrpides; Travis J. Lawrence; Supratim Mukherjee; Mats B. Nilsson; Krishnaveni Palaniappan; Dale A. Pelletier; Christa Pennacchio; T. B.K. Reddy; Simon Roux; A. Jonathan Shaw; Denis Warshan; Tatjana Živkovic; David J. Weston

doi:10.1128/mra.00400-22

Draft Metagenome Sequences of the Sphagnum (Peat Moss) Microbiome from Ambient and Warmed Environments across Europe

Bryan T. Piatkowski, Dana L. Carper, Alyssa A. Carrell, I. Min A. Chen, Alicia Clum, Chris Daum, Emiley A. Eloe-Fadrosh, Daniel Gilbert, Gustaf Granath, Marcel Huntemann, Sara S. Jawdy, Ingeborg Jenneken Klarenberg, Joel E. Kostka, Nikos C. Kyrpides, Travis J. Lawrence, Supratim Mukherjee, Mats B. Nilsson, Krishnaveni Palaniappan, Dale A. Pelletier, Christa PennacchioT. B.K. Reddy, Simon Roux, A. Jonathan Shaw, Denis Warshan, Tatjana Živkovic, David J. Weston

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Abstract

We present 49 metagenome assemblies of the microbiome associated with Sphagnum (peat moss) collected from ambient, artificially warmed, and geothermally warmed conditions across Europe. These data will enable further research regarding the impact of climate change on plant-microbe symbiosis, ecology, and ecosystem functioning of northern peatland ecosystems.

Original language	English
Journal	Microbiology Resource Announcements
Volume	11
Issue number	10
DOIs	https://doi.org/10.1128/mra.00400-22
State	Published - Oct 2022

Funding

Oak Ridge National Laboratory is managed by UT-Battelle, LLC, for the U.S. DOE under contract DE-AC05-00OR22725. Sample collection, processing, and manuscript writing were supported by the U.S. DOE BER Early Career Research Program. The work (https://www.osti .gov/award-doi-service/biblio/10.46936/10.25585/60001200) conducted by the U.S. DOE JGI (https://ror.org/04xm1d337), a DOE Office of Science User Facility, is supported by the Office of Science of the U.S. DOE operated under contract DE-AC02-05CH11231. This work was supported in part by the National Science Foundation (Division of Environmental Biology grant 1754756 to J.E.K. and D.J.W.) and by a U.S. DOE, Office of Science, Office of Biological and Environmental Research, Genomic Science Program Grant to D.J.W. under award DESC0020362. The manuscript has been authored by UT-Battelle, LLC, under contract DE-AC05-00OR22725 with the U.S. DOE.

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Piatkowski, B. T., Carper, D. L., Carrell, A. A., Chen, I. M. A., Clum, A., Daum, C., Eloe-Fadrosh, E. A., Gilbert, D., Granath, G., Huntemann, M., Jawdy, S. S., Jenneken Klarenberg, I., Kostka, J. E., Kyrpides, N. C., Lawrence, T. J., Mukherjee, S., Nilsson, M. B., Palaniappan, K., Pelletier, D. A., ... Weston, D. J. (2022). Draft Metagenome Sequences of the Sphagnum (Peat Moss) Microbiome from Ambient and Warmed Environments across Europe. Microbiology Resource Announcements, 11(10). https://doi.org/10.1128/mra.00400-22

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title = "Draft Metagenome Sequences of the Sphagnum (Peat Moss) Microbiome from Ambient and Warmed Environments across Europe",

abstract = "We present 49 metagenome assemblies of the microbiome associated with Sphagnum (peat moss) collected from ambient, artificially warmed, and geothermally warmed conditions across Europe. These data will enable further research regarding the impact of climate change on plant-microbe symbiosis, ecology, and ecosystem functioning of northern peatland ecosystems.",

author = "Piatkowski, {Bryan T.} and Carper, {Dana L.} and Carrell, {Alyssa A.} and Chen, {I. Min A.} and Alicia Clum and Chris Daum and Eloe-Fadrosh, {Emiley A.} and Daniel Gilbert and Gustaf Granath and Marcel Huntemann and Jawdy, {Sara S.} and {Jenneken Klarenberg}, Ingeborg and Kostka, {Joel E.} and Kyrpides, {Nikos C.} and Lawrence, {Travis J.} and Supratim Mukherjee and Nilsson, {Mats B.} and Krishnaveni Palaniappan and Pelletier, {Dale A.} and Christa Pennacchio and Reddy, {T. B.K.} and Simon Roux and Shaw, {A. Jonathan} and Denis Warshan and Tatjana {\v Z}ivkovic and Weston, {David J.}",

year = "2022",

month = oct,

doi = "10.1128/mra.00400-22",

language = "English",

volume = "11",

journal = "Microbiology Resource Announcements",

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Piatkowski, BT, Carper, DL , Carrell, AA, Chen, IMA, Clum, A, Daum, C, Eloe-Fadrosh, EA, Gilbert, D, Granath, G, Huntemann, M, Jawdy, SS, Jenneken Klarenberg, I, Kostka, JE, Kyrpides, NC, Lawrence, TJ, Mukherjee, S, Nilsson, MB, Palaniappan, K, Pelletier, DA, Pennacchio, C, Reddy, TBK, Roux, S, Shaw, AJ, Warshan, D, Živkovic, T & Weston, DJ 2022, 'Draft Metagenome Sequences of the Sphagnum (Peat Moss) Microbiome from Ambient and Warmed Environments across Europe', Microbiology Resource Announcements, vol. 11, no. 10. https://doi.org/10.1128/mra.00400-22

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AU - Piatkowski, Bryan T.

AU - Carper, Dana L.

AU - Carrell, Alyssa A.

AU - Chen, I. Min A.

AU - Clum, Alicia

AU - Daum, Chris

AU - Eloe-Fadrosh, Emiley A.

AU - Gilbert, Daniel

AU - Granath, Gustaf

AU - Huntemann, Marcel

AU - Jawdy, Sara S.

AU - Jenneken Klarenberg, Ingeborg

AU - Kostka, Joel E.

AU - Kyrpides, Nikos C.

AU - Lawrence, Travis J.

AU - Mukherjee, Supratim

AU - Nilsson, Mats B.

AU - Palaniappan, Krishnaveni

AU - Pelletier, Dale A.

AU - Pennacchio, Christa

AU - Reddy, T. B.K.

AU - Roux, Simon

AU - Shaw, A. Jonathan

AU - Warshan, Denis

AU - Živkovic, Tatjana

AU - Weston, David J.

PY - 2022/10

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AB - We present 49 metagenome assemblies of the microbiome associated with Sphagnum (peat moss) collected from ambient, artificially warmed, and geothermally warmed conditions across Europe. These data will enable further research regarding the impact of climate change on plant-microbe symbiosis, ecology, and ecosystem functioning of northern peatland ecosystems.

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Draft Metagenome Sequences of the Sphagnum (Peat Moss) Microbiome from Ambient and Warmed Environments across Europe

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