Divergent responses of forest soil microbial communities under elevated CO2 in different depths of upper soil layers

Hao Yu, Zhili He, Aijie Wang, Jianping Xie, Liyou Wu, Joy D. Van Nostrand, Decai Jin, Zhimin Shao, Christopher W. Schadt, Jizhong Zhou, Ye Deng

Research output: Contribution to journalArticlepeer-review

25 Scopus citations

Abstract

Numerous studies have shown that the continuous increase of atmosphere CO2 concentrations may have profound effects on the forest ecosystem and its functions. However, little is known about the response of belowground soil microbial communities under elevated atmospheric CO2 (eCO2) at different soil depth profiles in forest ecosystems. Here, we examined soil microbial communities at two soil depths (0 to 5 cm and 5 to 15 cm) after a 10-year eCO2 exposure using a highthroughput functional gene microarray (GeoChip). The results showed that eCO2 significantly shifted the compositions, including phylogenetic and functional gene structures, of soil microbial communities at both soil depths. Key functional genes, including those involved in carbon degradation and fixation, methane metabolism, denitrification, ammonification, and nitrogen fixation, were stimulated under eCO2 at both soil depths, although the stimulation effect of eCO2 on these functional markers was greater at the soil depth of 0 to 5 cm than of 5 to 15 cm. Moreover, a canonical correspondence analysis suggested that NO3-N, total nitrogen (TN), total carbon (TC), and leaf litter were significantly correlated with the composition of the whole microbial community. This study revealed a positive feedback of eCO2 in forest soil microbial communities, which may provide new insight for a further understanding of forest ecosystem responses to global CO2 increases.

Original languageEnglish
Article numbere01694-17
JournalApplied and Environmental Microbiology
Volume84
Issue number1
DOIs
StatePublished - Jan 1 2018

Funding

We thank Richard J. Norby for providing plant response data. We also thank James Walter Voordeckers for carefully editing the grammar of the manuscript and for some valuable suggestions for the final version. This project was supported by the Strategic Priority Research Program of the Chinese Academy of Sciences ([CAS] grant XDB15010302), the National Natural Science Foundation of China (grant no. 31540071), the National Key Research and Development Program (grant no. 2016YFC0500702), the China Postdoctoral Science Foundation (2016M601145), and the Natural Science Foundation of Liaoning Province of China (201602361)

FundersFunder number
National Natural Science Foundation of China31540071
Chinese Academy of SciencesCAS, XDB15010302
China Postdoctoral Science Foundation2016M601145
Natural Science Foundation of Liaoning Province201602361
National Basic Research Program of China (973 Program)2016YFC0500702

    Keywords

    • Elevated carbon dioxide
    • Forest ecosystem
    • Free-air CO enrichment
    • Functional genes
    • Microbial responses
    • Soil microbial community

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