Complete genome sequences of Caldicellulosiruptor sp. strain Rt8.B8, Caldicellulosiruptor sp. strain Wai35.B1, and "Thermoanaerobacter cellulolyticus"

Laura L. Lee; Javier A. Izquierdo; Sara E. Blumer-Schuette; Jeffrey V. Zurawski; Jonathan M. Conway; Robert W. Cottingham; Marcel Huntemann; Alex Copeland; I. Min A. Chen; Nikos Kyrpides; Victor Markowitz; Krishnaveni Palaniappan; Natalia Ivanova; Natalia Mikhailova; Galina Ovchinnikova; Evan Andersen; Amrita Pati; Dimitrios Stamatis; T. B.K. Reddy; Nicole Shapiro; Henrik P. Nordberg; Michael N. Cantor; Susan X. Hua; Tanja Woyke; Robert M. Kelly

doi:10.1128/genomeA.00440-15

Complete genome sequences of Caldicellulosiruptor sp. strain Rt8.B8, Caldicellulosiruptor sp. strain Wai35.B1, and "Thermoanaerobacter cellulolyticus"

Laura L. Lee, Javier A. Izquierdo, Sara E. Blumer-Schuette, Jeffrey V. Zurawski, Jonathan M. Conway, Robert W. Cottingham, Marcel Huntemann, Alex Copeland, I. Min A. Chen, Nikos Kyrpides, Victor Markowitz, Krishnaveni Palaniappan, Natalia Ivanova, Natalia Mikhailova, Galina Ovchinnikova, Evan Andersen, Amrita Pati, Dimitrios Stamatis, T. B.K. Reddy, Nicole ShapiroHenrik P. Nordberg, Michael N. Cantor, Susan X. Hua, Tanja Woyke, Robert M. Kelly

Computational and Predictive Biology

Research output: Contribution to journal › Article › peer-review

13 Scopus citations

Abstract

The genus Caldicellulosiruptor contains extremely thermophilic, cellulolytic bacteria capable of lignocellulose deconstruction. Currently, complete genome sequences for eleven Caldicellulosiruptor species are available. Here, we report genome sequences for three additional Caldicellulosiruptor species: Rt8.B8 DSM 8990 (New Zealand), Wai35.B1 DSM 8977 (New Zealand), and "Thermoanaerobacter cellulolyticus" strain NA10 DSM 8991 (Japan).

Original language	English
Article number	e00440-15
Journal	Genome Announcements
Volume	3
Issue number	3
DOIs	https://doi.org/10.1128/genomeA.00440-15
State	Published - 2015

Funding

The BioEnergy Science Center (BESC) is a U.S. Department of Energy Bioenergy Research Center supported by the Office of Biological and Environmental Research in the DOE Office of Science. The work conducted by the U.S. Department of Energy Joint Genome Institute, aDOEOffice of Science User Facility, is supported by the Office of Science of the U.S. Department of Energy under contract no. DE-AC02-05CH11231. L.L.L. acknowledges support from an NIH Biotechnology Traineeship (NIH T32 GM008776-11) and J.M.C. acknowledges support from a U.S. Department of Education GAANN fellowship (P200A100004-12).

Funders	Funder number
BioEnergy Science Center
DOE Office of Science
NIH Biotechnology Traineeship
NIH T32 GM008776-11	T32 GM008776-11
Office of Biological and Environmental Research
U.S. Department of Energy Bioenergy Research Center
U.S. Department of Energy Joint Genome Institute
U.S. Department of Energy	DE-AC02-05CH11231
U.S. Department of Education	P200A100004-12
Office of Science

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Lee, L. L., Izquierdo, J. A., Blumer-Schuette, S. E., Zurawski, J. V., Conway, J. M., Cottingham, R. W., Huntemann, M., Copeland, A., Chen, I. M. A., Kyrpides, N., Markowitz, V., Palaniappan, K., Ivanova, N., Mikhailova, N., Ovchinnikova, G., Andersen, E., Pati, A., Stamatis, D., Reddy, T. B. K., ... Kelly, R. M. (2015). Complete genome sequences of Caldicellulosiruptor sp. strain Rt8.B8, Caldicellulosiruptor sp. strain Wai35.B1, and "Thermoanaerobacter cellulolyticus". Genome Announcements, 3(3), Article e00440-15. https://doi.org/10.1128/genomeA.00440-15

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title = "Complete genome sequences of Caldicellulosiruptor sp. strain Rt8.B8, Caldicellulosiruptor sp. strain Wai35.B1, and {"}Thermoanaerobacter cellulolyticus{"}",

abstract = "The genus Caldicellulosiruptor contains extremely thermophilic, cellulolytic bacteria capable of lignocellulose deconstruction. Currently, complete genome sequences for eleven Caldicellulosiruptor species are available. Here, we report genome sequences for three additional Caldicellulosiruptor species: Rt8.B8 DSM 8990 (New Zealand), Wai35.B1 DSM 8977 (New Zealand), and {"}Thermoanaerobacter cellulolyticus{"} strain NA10 DSM 8991 (Japan).",

author = "Lee, {Laura L.} and Izquierdo, {Javier A.} and Blumer-Schuette, {Sara E.} and Zurawski, {Jeffrey V.} and Conway, {Jonathan M.} and Cottingham, {Robert W.} and Marcel Huntemann and Alex Copeland and Chen, {I. Min A.} and Nikos Kyrpides and Victor Markowitz and Krishnaveni Palaniappan and Natalia Ivanova and Natalia Mikhailova and Galina Ovchinnikova and Evan Andersen and Amrita Pati and Dimitrios Stamatis and Reddy, {T. B.K.} and Nicole Shapiro and Nordberg, {Henrik P.} and Cantor, {Michael N.} and Hua, {Susan X.} and Tanja Woyke and Kelly, {Robert M.}",

note = "Publisher Copyright: {\textcopyright} 2015 Lee et al.",

year = "2015",

doi = "10.1128/genomeA.00440-15",

language = "English",

volume = "3",

journal = "Genome Announcements",

issn = "2169-8287",

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Lee, LL, Izquierdo, JA, Blumer-Schuette, SE, Zurawski, JV, Conway, JM, Cottingham, RW, Huntemann, M, Copeland, A, Chen, IMA, Kyrpides, N, Markowitz, V, Palaniappan, K, Ivanova, N, Mikhailova, N, Ovchinnikova, G, Andersen, E, Pati, A, Stamatis, D, Reddy, TBK, Shapiro, N, Nordberg, HP, Cantor, MN, Hua, SX, Woyke, T & Kelly, RM 2015, 'Complete genome sequences of Caldicellulosiruptor sp. strain Rt8.B8, Caldicellulosiruptor sp. strain Wai35.B1, and "Thermoanaerobacter cellulolyticus"', Genome Announcements, vol. 3, no. 3, e00440-15. https://doi.org/10.1128/genomeA.00440-15

TY - JOUR

T1 - Complete genome sequences of Caldicellulosiruptor sp. strain Rt8.B8, Caldicellulosiruptor sp. strain Wai35.B1, and "Thermoanaerobacter cellulolyticus"

AU - Lee, Laura L.

AU - Izquierdo, Javier A.

AU - Blumer-Schuette, Sara E.

AU - Zurawski, Jeffrey V.

AU - Conway, Jonathan M.

AU - Cottingham, Robert W.

AU - Huntemann, Marcel

AU - Copeland, Alex

AU - Chen, I. Min A.

AU - Kyrpides, Nikos

AU - Markowitz, Victor

AU - Palaniappan, Krishnaveni

AU - Ivanova, Natalia

AU - Mikhailova, Natalia

AU - Ovchinnikova, Galina

AU - Andersen, Evan

AU - Pati, Amrita

AU - Stamatis, Dimitrios

AU - Reddy, T. B.K.

AU - Shapiro, Nicole

AU - Nordberg, Henrik P.

AU - Cantor, Michael N.

AU - Hua, Susan X.

AU - Woyke, Tanja

AU - Kelly, Robert M.

PY - 2015

Y1 - 2015

N2 - The genus Caldicellulosiruptor contains extremely thermophilic, cellulolytic bacteria capable of lignocellulose deconstruction. Currently, complete genome sequences for eleven Caldicellulosiruptor species are available. Here, we report genome sequences for three additional Caldicellulosiruptor species: Rt8.B8 DSM 8990 (New Zealand), Wai35.B1 DSM 8977 (New Zealand), and "Thermoanaerobacter cellulolyticus" strain NA10 DSM 8991 (Japan).

AB - The genus Caldicellulosiruptor contains extremely thermophilic, cellulolytic bacteria capable of lignocellulose deconstruction. Currently, complete genome sequences for eleven Caldicellulosiruptor species are available. Here, we report genome sequences for three additional Caldicellulosiruptor species: Rt8.B8 DSM 8990 (New Zealand), Wai35.B1 DSM 8977 (New Zealand), and "Thermoanaerobacter cellulolyticus" strain NA10 DSM 8991 (Japan).

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U2 - 10.1128/genomeA.00440-15

DO - 10.1128/genomeA.00440-15

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SN - 2169-8287

VL - 3

JO - Genome Announcements

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ER -

Complete genome sequences of Caldicellulosiruptor sp. strain Rt8.B8, Caldicellulosiruptor sp. strain Wai35.B1, and "Thermoanaerobacter cellulolyticus"

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