Complete genome sequence of Thermoanaerobacterium sp. strain RBIITD, a butyrate- and butanol-producing thermophile

Ranjita Biswas; Marcel Huntemann; Alicia Clum; Manoj Pillay; Krishnaveni Palaniappan; Neha Varghese; Natalia Mikhailova; Dimitrios Stamatis; T. B.K. Reddy; Chris Daum; Nicole Shapiro; Natalia Ivanova; Nikos C. Kyrpides; Tanja Woyke; Adam M. Guss

doi:10.1128/genomeA.01411-17

Complete genome sequence of Thermoanaerobacterium sp. strain RBIITD, a butyrate- and butanol-producing thermophile

Ranjita Biswas, Marcel Huntemann, Alicia Clum, Manoj Pillay, Krishnaveni Palaniappan, Neha Varghese, Natalia Mikhailova, Dimitrios Stamatis, T. B.K. Reddy, Chris Daum, Nicole Shapiro, Natalia Ivanova, Nikos C. Kyrpides, Tanja Woyke, Adam M. Guss

Synthetic Biology

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2 Scopus citations

Abstract

Thermoanaerobacterium sp. strain RBIITD was isolated from contaminated rich growth medium at 55°C in an anaerobic chamber. It primarily produces butyrate as a fermentation product from plant biomass-derived sugars. The whole-genome sequence of the strain is 3.4 Mbp, with 3,444 genes and 32.48% GC content.

Original language	English
Article number	e01411-17
Journal	Genome Announcements
Volume	6
Issue number	2
DOIs	https://doi.org/10.1128/genomeA.01411-17
State	Published - Jan 1 2018

Funding

This work was supported by the BioEnergy Science Center, U.S. DOE Bioenergy Research Center, supported by the Office of Biological and Environmental Research in the DOE Office of Science, Oak Ridge National Laboratory is managed by UT-Battelle, LLC, for the U.S. DOE under contract DE-AC05-00OR22725. The sequencing and data analysis work were conducted by the U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility, which is supported by the Office of Science of the U.S. Department of Energy under contract DE-AC02-05CH11231. R.B. gratefully acknowledges the award of the Ramalingaswami Fellowship 2014 and research grants by the Department of Biotechnology, Government of India.

Funders	Funder number
BioEnergy Science Center
DOE Office of Science
DOE Office of Science user facility
Office of Biological and Environmental Research
U.S. DOE Bioenergy Research Center
U.S. Department of Energy Joint Genome Institute
UT-Battelle	DE-AC05-00OR22725
U.S. Department of Energy	DE-AC02-05CH11231
Office of Science
Oak Ridge National Laboratory
Department of Biotechnology, Government of West Bengal

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Biswas, R., Huntemann, M., Clum, A., Pillay, M., Palaniappan, K., Varghese, N., Mikhailova, N., Stamatis, D., Reddy, T. B. K., Daum, C., Shapiro, N., Ivanova, N., Kyrpides, N. C., Woyke, T., & Guss, A. M. (2018). Complete genome sequence of Thermoanaerobacterium sp. strain RBIITD, a butyrate- and butanol-producing thermophile. Genome Announcements, 6(2), Article e01411-17. https://doi.org/10.1128/genomeA.01411-17

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abstract = "Thermoanaerobacterium sp. strain RBIITD was isolated from contaminated rich growth medium at 55°C in an anaerobic chamber. It primarily produces butyrate as a fermentation product from plant biomass-derived sugars. The whole-genome sequence of the strain is 3.4 Mbp, with 3,444 genes and 32.48% GC content.",

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Biswas, R, Huntemann, M, Clum, A, Pillay, M, Palaniappan, K, Varghese, N, Mikhailova, N, Stamatis, D, Reddy, TBK, Daum, C, Shapiro, N, Ivanova, N, Kyrpides, NC, Woyke, T & Guss, AM 2018, 'Complete genome sequence of Thermoanaerobacterium sp. strain RBIITD, a butyrate- and butanol-producing thermophile', Genome Announcements, vol. 6, no. 2, e01411-17. https://doi.org/10.1128/genomeA.01411-17

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AU - Shapiro, Nicole

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Complete genome sequence of Thermoanaerobacterium sp. strain RBIITD, a butyrate- and butanol-producing thermophile

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