Complete genome sequence of the hyperthermophilic sulfate-reducing bacterium Thermodesulfobacterium geofontis OPF15T

James G. Elkins; Scott D. Hamilton-Brehm; Susan Lucas; James Han; Alla Lapidus; Jan Fang Cheng; Lynne A. Goodwin; Sam Pitluck; Lin Peters; Natalia Mikhailova; Karen W. Davenport; John C. Detter; Cliff S. Han; Roxanne Tapia; Miriam L. Land; Loren Hauser; Nikos C. Kyrpides; Natalia N. Ivanova; Ioanna Pagani; David Bruce; Tanja Woyke; Robert W. Cottingham

doi:10.1128/genomeA.00162-13

Complete genome sequence of the hyperthermophilic sulfate-reducing bacterium Thermodesulfobacterium geofontis OPF15^T

James G. Elkins, Scott D. Hamilton-Brehm, Susan Lucas, James Han, Alla Lapidus, Jan Fang Cheng, Lynne A. Goodwin, Sam Pitluck, Lin Peters, Natalia Mikhailova, Karen W. Davenport, John C. Detter, Cliff S. Han, Roxanne Tapia, Miriam L. Land, Loren Hauser, Nikos C. Kyrpides, Natalia N. Ivanova, Ioanna Pagani, David BruceTanja Woyke, Robert W. Cottingham

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4 Scopus citations

Abstract

Thermodesulfobacterium geofontis OPF15^T (ATCC BAA-2454, JCM 18567) was isolated from Obsidian Pool, Yellowstone National Park, and grows optimally at 83°C. The 1.6-Mb genome sequence was finished at the Joint Genome Institute and has been deposited for future genomic studies pertaining to microbial processes and nutrient cycles in high-temperature environments.

Original language	English
Article number	e00162-13
Journal	Genome Announcements
Volume	1
Issue number	2
DOIs	https://doi.org/10.1128/genomeA.00162-13
State	Published - 2013

Funding

The BioEnergy Science Center is a U.S. Department of Energy Bioenergy Research Center supported by the Office of Biological and Environmental Research in the DOE Office of Science. Oak Ridge National Laboratory is managed by UT-Battelle, LLC, for the U.S. Department of Energy under contract DE-AC05-00OR22725. The work conducted by the U.S. Department of Energy Joint Genome Institute is supported by the Office of Science of the U.S. Department of Energy under contract no. DE-AC02-05CH11231.

Funders	Funder number
BioEnergy Science Center
DOE Office of Science
Office of Biological and Environmental Research
U.S. Department of Energy Bioenergy Research Center
U.S. Department of Energy Joint Genome Institute
UT-Battelle
U.S. Department of Energy	DE-AC05-00OR22725
Office of Science	DE-AC02-05CH11231
Oak Ridge National Laboratory

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Elkins, J. G., Hamilton-Brehm, S. D., Lucas, S., Han, J., Lapidus, A., Cheng, J. F., Goodwin, L. A., Pitluck, S., Peters, L., Mikhailova, N., Davenport, K. W., Detter, J. C., Han, C. S., Tapia, R., Land, M. L., Hauser, L., Kyrpides, N. C., Ivanova, N. N., Pagani, I., ... Cottingham, R. W. (2013). Complete genome sequence of the hyperthermophilic sulfate-reducing bacterium Thermodesulfobacterium geofontis OPF15^T. Genome Announcements, 1(2), Article e00162-13. https://doi.org/10.1128/genomeA.00162-13

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title = "Complete genome sequence of the hyperthermophilic sulfate-reducing bacterium Thermodesulfobacterium geofontis OPF15T",

abstract = "Thermodesulfobacterium geofontis OPF15T (ATCC BAA-2454, JCM 18567) was isolated from Obsidian Pool, Yellowstone National Park, and grows optimally at 83°C. The 1.6-Mb genome sequence was finished at the Joint Genome Institute and has been deposited for future genomic studies pertaining to microbial processes and nutrient cycles in high-temperature environments.",

author = "Elkins, {James G.} and Hamilton-Brehm, {Scott D.} and Susan Lucas and James Han and Alla Lapidus and Cheng, {Jan Fang} and Goodwin, {Lynne A.} and Sam Pitluck and Lin Peters and Natalia Mikhailova and Davenport, {Karen W.} and Detter, {John C.} and Han, {Cliff S.} and Roxanne Tapia and Land, {Miriam L.} and Loren Hauser and Kyrpides, {Nikos C.} and Ivanova, {Natalia N.} and Ioanna Pagani and David Bruce and Tanja Woyke and Cottingham, {Robert W.}",

note = "Publisher Copyright: {\textcopyright} 2013 Elkins et al.",

year = "2013",

doi = "10.1128/genomeA.00162-13",

language = "English",

volume = "1",

journal = "Genome Announcements",

issn = "2169-8287",

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Elkins, JG, Hamilton-Brehm, SD, Lucas, S, Han, J, Lapidus, A, Cheng, JF, Goodwin, LA, Pitluck, S, Peters, L, Mikhailova, N, Davenport, KW, Detter, JC, Han, CS, Tapia, R, Land, ML, Hauser, L, Kyrpides, NC, Ivanova, NN, Pagani, I, Bruce, D, Woyke, T & Cottingham, RW 2013, 'Complete genome sequence of the hyperthermophilic sulfate-reducing bacterium Thermodesulfobacterium geofontis OPF15^T', Genome Announcements, vol. 1, no. 2, e00162-13. https://doi.org/10.1128/genomeA.00162-13

TY - JOUR

T1 - Complete genome sequence of the hyperthermophilic sulfate-reducing bacterium Thermodesulfobacterium geofontis OPF15T

AU - Elkins, James G.

AU - Hamilton-Brehm, Scott D.

AU - Lucas, Susan

AU - Han, James

AU - Lapidus, Alla

AU - Cheng, Jan Fang

AU - Goodwin, Lynne A.

AU - Pitluck, Sam

AU - Peters, Lin

AU - Mikhailova, Natalia

AU - Davenport, Karen W.

AU - Detter, John C.

AU - Han, Cliff S.

AU - Tapia, Roxanne

AU - Land, Miriam L.

AU - Hauser, Loren

AU - Kyrpides, Nikos C.

AU - Ivanova, Natalia N.

AU - Pagani, Ioanna

AU - Bruce, David

AU - Woyke, Tanja

AU - Cottingham, Robert W.

PY - 2013

Y1 - 2013

N2 - Thermodesulfobacterium geofontis OPF15T (ATCC BAA-2454, JCM 18567) was isolated from Obsidian Pool, Yellowstone National Park, and grows optimally at 83°C. The 1.6-Mb genome sequence was finished at the Joint Genome Institute and has been deposited for future genomic studies pertaining to microbial processes and nutrient cycles in high-temperature environments.

AB - Thermodesulfobacterium geofontis OPF15T (ATCC BAA-2454, JCM 18567) was isolated from Obsidian Pool, Yellowstone National Park, and grows optimally at 83°C. The 1.6-Mb genome sequence was finished at the Joint Genome Institute and has been deposited for future genomic studies pertaining to microbial processes and nutrient cycles in high-temperature environments.

UR - http://www.scopus.com/inward/record.url?scp=84995900530&partnerID=8YFLogxK

U2 - 10.1128/genomeA.00162-13

DO - 10.1128/genomeA.00162-13

M3 - Article

AN - SCOPUS:84995900530

SN - 2169-8287

VL - 1

JO - Genome Announcements

JF - Genome Announcements

IS - 2

M1 - e00162-13

ER -

Complete genome sequence of the hyperthermophilic sulfate-reducing bacterium Thermodesulfobacterium geofontis OPF15^T

Abstract

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