Complete genome sequence of Luteolibacter sp. strain Populi, a member of phylum Verrucomicrobiota isolated from the Populus trichocarpa rhizosphere

Sora Imai; Benjamin Allen; Leah H. Hochanadel; William G. Alexander; Robert W. Cottingham; Christopher W. Schadt; Dale A. Pelletier; Mircea Podar

doi:10.1128/mra.00801-24

Complete genome sequence of Luteolibacter sp. strain Populi, a member of phylum Verrucomicrobiota isolated from the Populus trichocarpa rhizosphere

Sora Imai, Benjamin Allen, Leah H. Hochanadel, William G. Alexander, Robert W. Cottingham, Christopher W. Schadt, Dale A. Pelletier, Mircea Podar

Research output: Contribution to journal › Article › peer-review

Abstract

Luteolibacter sp. strain Populi is a bacterium from the phylum Verrucomicrobiota, isolated from the rhizosphere of a black cottonwood tree, Populus trichocarpa, from the Cascade mountains in Washington. Its 6.6-Mb chromosome was completely sequenced using Oxford Nanopore long-read sequencing and is predicted to encode 5,301 proteins and 60 RNAs.

Original language	English
Journal	Microbiology Resource Announcements
Volume	13
Issue number	9
DOIs	https://doi.org/10.1128/mra.00801-24
State	Published - Sep 2024

Funding

This research was funded by the U.S. DOE Officeof Biological and Environmental Research, Genomic Science Program as part of the Plant Microbe Interfaces ScientificFocus Area (http://pmi.ornl.gov) and the Systems Biology Knowledgebase (https://www.kbase.us). Oak Ridge National Laboratory is managed by UT-Battelle, LLC, for the U.S. Department of Energy under contract DE-AC05-00OR22725. U.S. Department of Energy (DOE) Plant Microbe Interfaces ScientificScientific Scientific Focus Area Sora Imai Benjamin Allen Leah H. Hochanadel William G. Alexander Robert W. Cottingham Christopher W. Schadt Dale A. Pelletier Mircea Podar

Keywords

rhizosphere-inhabiting microbes

Access to Document

10.1128/mra.00801-24

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title = "Complete genome sequence of Luteolibacter sp. strain Populi, a member of phylum Verrucomicrobiota isolated from the Populus trichocarpa rhizosphere",

abstract = "Luteolibacter sp. strain Populi is a bacterium from the phylum Verrucomicrobiota, isolated from the rhizosphere of a black cottonwood tree, Populus trichocarpa, from the Cascade mountains in Washington. Its 6.6-Mb chromosome was completely sequenced using Oxford Nanopore long-read sequencing and is predicted to encode 5,301 proteins and 60 RNAs.",

keywords = "rhizosphere-inhabiting microbes",

author = "Sora Imai and Benjamin Allen and Hochanadel, \{Leah H.\} and Alexander, \{William G.\} and Cottingham, \{Robert W.\} and Schadt, \{Christopher W.\} and Pelletier, \{Dale A.\} and Mircea Podar",

note = "Publisher Copyright: {\textcopyright} 2024 Imai et al.",

year = "2024",

month = sep,

doi = "10.1128/mra.00801-24",

language = "English",

volume = "13",

journal = "Microbiology Resource Announcements",

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T1 - Complete genome sequence of Luteolibacter sp. strain Populi, a member of phylum Verrucomicrobiota isolated from the Populus trichocarpa rhizosphere

AU - Imai, Sora

AU - Allen, Benjamin

AU - Hochanadel, Leah H.

AU - Alexander, William G.

AU - Cottingham, Robert W.

AU - Schadt, Christopher W.

AU - Pelletier, Dale A.

AU - Podar, Mircea

PY - 2024/9

Y1 - 2024/9

N2 - Luteolibacter sp. strain Populi is a bacterium from the phylum Verrucomicrobiota, isolated from the rhizosphere of a black cottonwood tree, Populus trichocarpa, from the Cascade mountains in Washington. Its 6.6-Mb chromosome was completely sequenced using Oxford Nanopore long-read sequencing and is predicted to encode 5,301 proteins and 60 RNAs.

AB - Luteolibacter sp. strain Populi is a bacterium from the phylum Verrucomicrobiota, isolated from the rhizosphere of a black cottonwood tree, Populus trichocarpa, from the Cascade mountains in Washington. Its 6.6-Mb chromosome was completely sequenced using Oxford Nanopore long-read sequencing and is predicted to encode 5,301 proteins and 60 RNAs.

KW - rhizosphere-inhabiting microbes

UR - https://www.scopus.com/pages/publications/85206329400

U2 - 10.1128/mra.00801-24

DO - 10.1128/mra.00801-24

M3 - Article

AN - SCOPUS:85206329400

SN - 2576-098X

VL - 13

JO - Microbiology Resource Announcements

JF - Microbiology Resource Announcements

IS - 9

ER -

Complete genome sequence of Luteolibacter sp. strain Populi, a member of phylum Verrucomicrobiota isolated from the Populus trichocarpa rhizosphere

Abstract

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Keywords

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