Combining phase identification and statistic modeling for automated parallel benchmark generation

Ye Jin, Xiaosong Ma, Mingliang Liu, Qing Liu, Jeremy Logan, Norbert Podhorszki, Jong Youl Choi, Scott Klasky

Research output: Contribution to journalConference articlepeer-review

10 Scopus citations

Abstract

Parallel application benchmarks are indispensable for evaluating/optimizing HPC software and hardware. However, it is very challenging and costly to obtain high-fidelity benchmarks reecting the scale and complexity of state-of-the-art parallel applications. Hand-extracted synthetic benchmarks are time- and labor-intensive to create. Real applications themselves, while offering most accurate performance evaluation, are expensive to compile, port, reconfigure, and often plainly inaccessible due to security or ownership concerns. This work contributes APPrime, a novel tool for tracebased automatic parallel benchmark generation. Taking as input standard communication-I/O traces of an application's execution, it couples accurate automatic phase identification with statistical regeneration of event parameters to create compact, portable, and to some degree reconfigurable parallel application benchmarks. Experiments with four NAS Parallel Benchmarks (NPB) and three real scientific simulation codes confirm the fidelity of APPrime benchmarks. They retain the original applications' performance characteristics, in particular their relative performance across platforms. Also, the result benchmarks, already released online, are much more compact and easy-toport compared to the original applications.

Original languageEnglish
Pages (from-to)309-320
Number of pages12
JournalPerformance Evaluation Review
Volume43
Issue number1
DOIs
StatePublished - Jun 24 2015
EventACM SIGMETRICS International Conference on Measurement and Modeling of Computer Systems, SIGMETRICS 2015 - Portland, United States
Duration: Jun 15 2015Jun 19 2015

Funding

We thank the anonymous reviewers for their valuable com-ments and suggestions. The work is facilitated by QCRI''s in-ternship program. It is also partially supported by research grants at involved institutes: NSF awards CCF-0937908, CCF-0937690, and CNS-1318564 (NCSU), DOE O_ce of Science, O_ce of Advanced Scienti_c Computing Research, SciDAC program, and Oak Ridge Leadership Computing Facility (ORNL), and the National High-Tech Research and Development Plan (863 project) 2012AA01A302 and NSFC project 61472201 (Tsinghua University).

FundersFunder number
DOE O_ce of Science
Oak Ridge National LaboratoryORNL
QCRI
National Sleep FoundationCNS-1318564, NCSU, CCF-0937908, CCF-0937690
National Natural Science Foundation of China61472201
Tsinghua University
National High-tech Research and Development Program2012AA01A302

    Keywords

    • Asynchronous I/O
    • Benchmark generation
    • HPC applications
    • Markov chain model
    • Phase identification
    • Traces

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