Climatic Clustering and Longitudinal Analysis with Impacts on Food, Bioenergy, and Pandemics

John Lagergren, Mikaela Cashman, Verónica G.Melesse Vergara, Paul R. Eller, Joao Gabriel Felipe Machado Gazolla, Hari B. Chhetri, Jared Streich, Sharlee Climer, Peter Thornton, Wayne Joubert, Daniel Jacobson

Research output: Contribution to journalArticlepeer-review

7 Scopus citations

Abstract

Predicted growth in world population will put unparalleled stress on the need for sustainable energy and global food production, as well as increase the likelihood of future pandemics. In this work, we identify high-resolution environmental zones in the context of a changing climate and predict longitudinal processes relevant to these challenges. We do this using exhaustive vector comparison methods that measure the climatic similarity between all locations on Earth at high geospatial resolution relative to global-scale analyses. The results are captured as networks, in which edges between geolocations are defined if their historical climate similarities exceed a threshold. We apply Markov clustering and our novel correlation of correlations method to the resulting climatic networks, which provides unprecedented agglomerative and longitudinal views of climatic relationships across the globe. The methods performed here resulted in the fastest (9.37 × 1018 operations/s) and one of the largest 168.7 × 1021 operations) scientific computations ever performed, with more than 100 quadrillion edges considered for a single climatic network. Our climatic analysis reveals areas of the world experiencing rapid environmental changes, which can have important implications for global carbon fluxes and zoonotic spillover events. Correlation and network analyses of this kind are widely applicable across computational and predictive biology domains, including systems biology, ecology, carbon cycles, biogeochemistry, and zoonosis research.

Original languageEnglish
Pages (from-to)65-77
Number of pages13
JournalPhytobiomes Journal
Volume7
Issue number1
DOIs
StatePublished - Jul 13 2023

Funding

Research in the DOE Office of Science). Funding was also provided by the United States Government as well as the National Institute on Aging of the National Institutes of Health under project 1RF1AG053303-01. This research used resources of the National Energy Research Scientific Computing Center (NERSC), a U.S. Department of Energy Office of 638 Science User Facility located at Lawrence Berkeley National Laboratory, operated under 639 Contract Number DE-AC02-05CH11231. Funding: This research used resources of the Oak Ridge Leadership Computing Facility allocated by the DOE ALCC program and was supported by the Center for Bioenergy Innovation, the Plant-Microbe Interface SFA, the Feedstock Genomics Program, the Exascale & Petascale Networks for KBase project, the Integrated Penny-cress Resilience Project (all supported by the Office of Biological and Environmental

FundersFunder number
Plant-Microbe Interface SFA
United States Government
National Institutes of Health1RF1AG053303-01
U.S. Department of Energy
National Institute on Aging
Office of Science
Lawrence Berkeley National LaboratoryDE-AC02-05CH11231
Center for Bioenergy Innovation

    Keywords

    • agriculture
    • climatology
    • ecology
    • natural habitats
    • virology

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