Abstract
Plants adapt to their changing environments by sensing and responding to physical, biological, and chemical stimuli. Due to their sessile lifestyles, plants experience a vast array of external stimuli and selectively perceive and respond to specific signals. By repurposing the logic circuitry and biological and molecular components used by plants in nature, genetically encoded plantbased biosensors (GEPBs) have been developed by directing signal recognition mechanisms into carefully assembled outcomes that are easily detected. GEPBs allow for in vivo monitoring of biological processes in plants to facilitate basic studies of plant growth and development. GEPBs are also useful for environmental monitoring, plant abiotic and biotic stress management, and accelerating design-build-test-learn cycles of plant bioengineering. With the advent of synthetic biology, biological and molecular components derived from alternate natural organisms (e.g., microbes) and/or de novo parts have been used to build GEPBs. In this review, we summarize the framework for engineering different types of GEPBs. We then highlight representative validated biological components for building plant-based biosensors, along with various applications of plantbased biosensors in basic and applied plant science research. Finally, we discuss challenges and strategies for the identification and design of biological components for plant-based biosensors.
Original language | English |
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Article number | 9863496 |
Journal | BioDesign Research |
Volume | 2022 |
DOIs | |
State | Published - 2022 |
Funding
The writing of this manuscript was supported by the U.S. Department of Energy (DOE) Genomic Science Program, as part of the Secure Ecosystem Engineering and Design Scientific (SEED) Focus Area and the Plant-Microbe Interfaces (PMI) Scientific Focus Area, and the Center for Bioenergy Innovation (CBI), a DOE Bioenergy Research Center supported by the Biological and Environmental Research (BER) program. Oak Ridge National Laboratory is managed by UT-Battelle, LLC for the U.S. Department of Energy under Contract Number DE-AC05-00OR22725. The support to Chang-jun Liu was partially from the DOE Office of Basic Energy Sciences, specifically through the Physical Biosciences program of the Chemical Sciences, Geosciences and Biosciences Division, under contract number DE-SC0012704.