Application of wavelets and kernel methods to detection and extraction of behaviours of freshwater mussels

Piotr Przymus, Krzysztof Rykaczewski, Ryszard Wiśniewski

Research output: Chapter in Book/Report/Conference proceedingConference contributionpeer-review

6 Scopus citations

Abstract

Some species of mussels are well-known bioindicators and may be used to create a Biological Early Warning System. Such systems use long-term observations of mussels activity for monitoring purposes. Yet, many of these systems are based on statistical methods and do not use all the potential that stays behind the data derived from the observations. In the paper we propose an algorithm based on wavelets and kernel methods to detect behaviour events in the collected data. We present our algorithm together with a discussion on the influence of various parameters on the received results. The study describes obtaining and pre-processing raw data and a feature extraction algorithm. Other papers which applied mathematical apparatus to Biological Early Warning Systems used much simpler methods and their effectiveness was questionable. We verify the results using a system with prepared tags for specified events. This leads us to a classification of these events and creating a Dreissena polymorpha behaviour dictionary and a Biological Early Warning System. Results from preliminary experiments show, that such a formulation of the problem, allows extracting relevant information from a given signal and yields an effective solution of the considered problem.

Original languageEnglish
Title of host publicationFuture Generation Information Technology - Third International Conference, FGIT 2011, in Conjunction with GDC 2011, Proceedings
Pages43-54
Number of pages12
DOIs
StatePublished - 2011
Externally publishedYes
Event2011 3rd International Mega-Conference on Future-Generation Information Technology, FGIT 2011, in Conjunction with GDC 2011 - Jeju Island, Korea, Republic of
Duration: Dec 8 2011Dec 10 2011

Publication series

NameLecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics)
Volume7105 LNCS
ISSN (Print)0302-9743
ISSN (Electronic)1611-3349

Conference

Conference2011 3rd International Mega-Conference on Future-Generation Information Technology, FGIT 2011, in Conjunction with GDC 2011
Country/TerritoryKorea, Republic of
CityJeju Island
Period12/8/1112/10/11

Funding

This work was supported in part by the Marshall of Kuyavian-Pomeranian Voivodeship in Poland with the funds from European Social Fund (EFS) (a part of integrated operational program for regional development, activity 2.6) in the form of a grant for PhD students (Step in the future program, second edition).

FundersFunder number
Marshall of Kuyavian-Pomeranian
European Social Fund
Etablissement français du sang

    Keywords

    • Automated biomonitoring
    • Biological Early Warning System
    • Time series
    • Wavelets
    • Zebra mussel (Dreissena polymorpha)

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