A parallel algorithm for implicit depletant simulations

Jens Glaser, Andrew S. Karas, Sharon C. Glotzer

Research output: Contribution to journalArticlepeer-review

17 Scopus citations

Abstract

We present an algorithm to simulate the many-body depletion interaction between anisotropic colloids in an implicit way, integrating out the degrees of freedom of the depletants, which we treat as an ideal gas. Because the depletant particles are statistically independent and the depletion interaction is short-ranged, depletants are randomly inserted in parallel into the excluded volume surrounding a single translated and/or rotated colloid. A configurational bias scheme is used to enhance the acceptance rate. The method is validated and benchmarked both on multi-core processors and graphics processing units for the case of hard spheres, hemispheres, and discoids. With depletants, we report novel cluster phases in which hemispheres first assemble into spheres, which then form ordered hcp/fcc lattices. The method is significantly faster than any method without cluster moves and that tracks depletants explicitly, for systems of colloid packing fraction φc < 0.50, and additionally enables simulation of the fluid-solid transition.

Original languageEnglish
Article number184110
JournalJournal of Chemical Physics
Volume143
Issue number18
DOIs
StatePublished - Nov 14 2015
Externally publishedYes

Funding

FundersFunder number
National Science FoundationACI-1053575
Simons Foundation
Directorate for Computer and Information Science and Engineering1053575

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