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A High-Quality Workflow for Multi-Resolution Scientific Data Reduction and Visualization

  • Daoce Wang
  • , Pascal Grosset
  • , Jesus Pulido
  • , Tushar M. Athawale
  • , Jiannan Tian
  • , Kai Zhao
  • , Zarija Lukic
  • , Axel Huebl
  • , Zhe Wang
  • , James Ahrens
  • , Dingwen Tao

Research output: Chapter in Book/Report/Conference proceedingConference contributionpeer-review

7 Scopus citations

Abstract

Multi-resolution methods such as Adaptive Mesh Refinement (AMR) can enhance storage efficiency for HPC applications generating vast volumes of data. However, their applicability is limited and cannot be universally deployed across all applications. Furthermore, integrating lossy compression with multi-resolution techniques to further boost storage efficiency encounters significant barriers. To this end, we introduce an innovative workflow that facilitates high-quality multi-resolution data compression for both uniform and AMR simulations. Initially, to extend the usability of multi-resolution techniques, our workflow employs a compression-oriented Region of Interest (ROI) extraction method, transforming uniform data into a multi-resolution format. Subsequently, to bridge the gap between multi-resolution techniques and lossy compressors, we optimize three distinct compressors, ensuring their optimal performance on multi-resolution data. These optimizations can improve the compression ratio of SOTA approaches by up to 3.3 × under the same data quality loss. Lastly, we incorporate an advanced uncertainty visualization method into our workflow to understand the potential impacts of lossy compression. Experimental evaluation demonstrates that our workflow achieves significant compression quality improvements.

Original languageEnglish
Title of host publicationProceedings of SC 2024
Subtitle of host publicationInternational Conference for High Performance Computing, Networking, Storage and Analysis
PublisherIEEE Computer Society
ISBN (Electronic)9798350352917
DOIs
StatePublished - Nov 17 2024
Event2024 International Conference for High Performance Computing, Networking, Storage and Analysis, SC 2024 - Atlanta, United States
Duration: Nov 17 2024Nov 22 2024

Publication series

NameInternational Conference for High Performance Computing, Networking, Storage and Analysis, SC
ISSN (Print)2167-4329
ISSN (Electronic)2167-4337

Conference

Conference2024 International Conference for High Performance Computing, Networking, Storage and Analysis, SC 2024
Country/TerritoryUnited States
CityAtlanta
Period11/17/2411/22/24

Funding

James Ahrens, Pascal Grosset, and Jesus Pulido are employees of Triad National Security, LLC, which operates Los Alamos National Laboratory under Contract No. 89233218CNA000001 with the U.S. Department of Energy (DOE) and National Nuclear Security Administration (NNSA), and their work on this project was funded by the U.S. DOE Office of Science (SC), Office of Advanced Scientific Computing Research (ASCR), under contracts DE-AC02-06CH11357 and DE-AC02-05CH11231 and the Exascale Computing Project (ECP), Project Number: 17-SC-20-SC, a collaborative effort of the DOE SC and NNSA. Tushar Athawale's funding was supported by the U.S. Department of Energy (DOE) RAPIDS-2 SciDAC project under contract number DE-AC0500OR22725. Daoce Wang and Dingwen Tao's work on this project was supported by the National Science Foundation (Grant Nos. 2312673, 2247080, and 2303064). DaoceWang was also supported by the Exascale Computing Project (ECP), Project Number: 17-SC-20-SC, a collaborative effort of the DOE SC and NNSA during his summer internship at Los Alamos National Laboratory. Dingwen Tao was also supported by the National Natural Science Foundation of China (Grant Nos. 62032023 and T2125013), and the Innovation Funding of ICT, CAS (Grant No. E461050). This material is also based upon work supported by the CAMPA collaboration, a project of the U.S. Department of Energy, Office of Science, Office of Advanced Scientific Computing Research and Office of High Energy Physics, Scientific Discovery through Advanced Computing (SciDAC) program.

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