Overview
Education/Academic qualification
Math-Applied, Doctorate Degree
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Climate adaptation in Populus trichocarpa: key adaptive loci identified for stomata and leaf traits
Klein, M. C., Meng, Z., Bailey-Bale, J., Milner, S., Shi, P., Muchero, W., Chen, J. G., Tschaplinski, T. J., Jacobson, D., Lagergren, J., Lane, M., O'Brien, C., Chhetri, H., Abeyratne, C. R., Shu, M., Freer-Smith, P., Buckley, T. N., Magney, T. S., Monroe, J. G. & Tuskan, G. A. & 1 others, , Sep 2025, In: New Phytologist. 247, 6, p. 2647-2664 18 p.Research output: Contribution to journal › Article › peer-review
Open Access8 Scopus citations -
Distributed Cross-Channel Hierarchical Aggregation for Foundation Models
Tsaris, A., Lyngaas, I., Lagergren, J., Wahib, M., York, L., Balaprakash, P., Lu, D., Wang, F. & Wang, X., Nov 15 2025, Proceedings of the International Conference for High Performance Computing, Networking, Storage, and Analysis, SC 2025. Association for Computing Machinery, Inc, p. 935-948 14 p. (Proceedings of the International Conference for High Performance Computing, Networking, Storage, and Analysis, SC 2025).Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review
Open Access -
Environmental and ecological signals predict food shortages for subtropical populations of Australian flying foxes, reservoirs of Hendra virus
Lagergren, J. H., Ruiz-Aravena, M., Becker, D. J., Madden, W. G., Ruytenberg, L., Hoegh, A., Han, B. A., Peel, A. J., Eby, P., Jacobson, D. & Plowright, R. K., Dec 1 2025, In: Biology letters. 21, 12Research output: Contribution to journal › Article › peer-review
Open Access -
Genomic Surveillance Detection of SARS-CoV-1-Like Viruses in Rhinolophidae Bats, Bandarban Region, Bangladesh
Bradburne, C., Islam, A., Bird, I., Abbott, E., Harrison, S., Chunn, M., Radune, D., Hasan, M. R., Janes, B., Lovett, S., Lagergren, J., O’Hanlon, T., Debnath, K., McKee, C., Hossain, M. E., Gallagher, M., Jacobson, D., Rahman, M. Z., Caviness, K. & Plowright, R. K. & 1 others, , Aug 2025, In: Emerging Infectious Diseases. 31, 8, p. 1652-1656 5 p.Research output: Contribution to journal › Article › peer-review
Open Access1 Scopus citations -
Leveraging hyperspectral phenotyping for accurate, non-destructive prediction of metabolite profiles in poplar under drought stress
Shu, M., Harfouche, A. L., Trtílek, M., Panzarová, K., Alasia, O. F., Lagergren, J. H., Labbé, A., Engle, N. L., Clark, M. M., Chen, J. G., Tuskan, G. A. & Tschaplinski, T. J., Sep 2025, In: Environmental and Experimental Botany. 237, 106218.Research output: Contribution to journal › Article › peer-review
Open Access1 Scopus citations
Datasets
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Supporting data for climatic clustering and longitudinal analysis with impacts on food, bioenergy, and pandemics
Lagergren, J. (Creator), Cashman, M. (Creator), Melesse Vergara, V. (Creator), Eller, P. R. (Creator), Felipe Machado Gazolla, J. G. (Creator), Chhetri, H. (Creator), Streich, J. (Creator), Climer, S. (Creator), Thornton, P. (Creator), Joubert, W. (Creator) & Jacobson, D. (Creator), Oak Ridge National Laboratory (ORNL), Oak Ridge, TN (United States). Oak Ridge Leadership Computing Facility (OLCF); Oak Ridge National Laboratory (ORNL), Oak Ridge, TN (United States), Nov 18 2021
DOI: 10.13139/ORNLNCCS/1828678
Dataset
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Supporting information for "Few-Shot Learning Enables Population-Scale Analysis of Leaf Traits in Populus trichocarpa"
Lagergren, J. (Creator), Pavicic Venegas, M. (Creator), Chhetri, H. (Creator), York, L. (Creator), Hyatt, D. (Creator), Kainer, D. (Creator), Rutter, E. M. (Creator), Flores, K. (Creator), Taylor, G. (Creator), Jacobson, D. (Creator) & Streich, J. (Creator), Oak Ridge National Laboratory (ORNL), Oak Ridge, TN (United States). Oak Ridge Leadership Computing Facility (OLCF); Oak Ridge National Laboratory (ORNL), Oak Ridge, TN (United States), Jan 26 2023
DOI: 10.13139/ORNLNCCS/1908723
Dataset