Projects per year
Overview
Education/Academic qualification
Chem-Chemistry, Doctorate Degree
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Dive into the research topics where Jerry Parks is active. These topic labels come from the works of this person. Together they form a unique fingerprint.
- 1 Similar Profiles
Researcher collaborations from the last five years
Based on publications and projects (not datasets). Dive into details by clicking on the dots or
Projects
- 2 Finished
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High throughput, accurate gene annotation through AI and HPC-enabled structural analysis
Skolnick, J. (PI), Cheng, J. (CoPI), Sedova, A. (CoPI) & Parks, J. (CoPI)
Biological and Environmental Research
09/15/20 → 09/14/23
Project: Research
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Multi-Scale Modeling Framework for Mercury Biogeochemistry
Smith, J. C. (PI), Parks, J. (CoPI) & Tang, G. G. (CoPI)
Biological and Environmental Research
08/15/16 → 08/14/20
Project: Research
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A novel bacterial protein family that catalyses nitrous oxide reduction
He, G., Wang, W., Chen, G., Xie, Y., Parks, J. M., Davin, M. E., Hettich, R. L., Konstantinidis, K. T. & Löffler, F. E., Oct 2 2025, In: Nature. 646, 8083, p. 152-160 9 p.Research output: Contribution to journal › Article › peer-review
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Comparative Analysis of TCR and TCR-pMHC Complex Structure Prediction Tools
Shi, Y., Parks, J. M. & Smith, J. C., Jul 14 2025, In: Journal of Chemical Information and Modeling. 65, 13, p. 7156-7173 18 p.Research output: Contribution to journal › Article › peer-review
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Engineered enzymatic cascade converts diols to amino alcohols
Valentino, H. R., Qian, L., Parks, J. M., Drufva, E. E., Sedova, A., Mehta, P. S., Watson, M. P., Giannone, R. J., Galanie, S. S. & Michener, J. K., May 6 2025, In: Green Chemistry. 27, 21, p. 6283-6292 10 p.Research output: Contribution to journal › Article › peer-review
Open Access -
Factors underlying a latitudinal gradient in the S/G lignin monomer ratio in natural poplar variants
Zhu, W., Zhang, J., Prabhakar, P. K., Chan, Y. O., Weber, R. A., Shu, M., Panzade, G., Cooper, C. J., Davidson, R. B., Parks, J. M., Urbanowicz, B. R., Tuskan, G. A., Joshi, T., Dixon, R. A., Muchero, W. & Barros, J., Aug 26 2025, In: Proceedings of the National Academy of Sciences of the United States of America. 122, 34, e2503491122.Research output: Contribution to journal › Article › peer-review
Open Access -
Identification and characterization of substrate- and product-selective nylon hydrolases
Drufva, E. E., Cahill, J. F., Saint-Vincent, P. M. B., Williams, A. N., Bocharova, V., Capra, N., Meilleur, F., Carper, D. L., Bourgery, C., Miyazaki, K., Yonemura, M., Shiraishi, Y., Parks, J. M., Zhou, M., Dishner, I. T., Foster, J. C., Koehler, S. J., Valentino, H. R., Sedova, A. & Kertesz, V. & 7 others, , Aug 21 2025, In: Chem Catalysis. 5, 8, 101418.Research output: Contribution to journal › Article › peer-review
1 Scopus citations
Datasets
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Proteome-scale Structure Prediction Data - Pseudodesulfovibrio mercurii
Davidson, R. B. (Creator), Coletti, M. (Creator), Gao, M. (Creator), Parks, J. (Creator) & Sedova, A. (Creator), Constellation by Oak Ridge Leadership Computing Facility (OLCF), Apr 11 2022
DOI: 10.13139/ORNLNCCS/1861307
Dataset
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Supporting Information for manuscript: “A latitudinal gradient in S/G lignin monomer ratio driven by laccase in natural poplar variants”
Zhu, W. (Creator), Zhang, J. (Creator), Prabhaker, P. (Creator), Yen, O. C. (Creator), Weber, R. (Creator), Panzade, G. (Creator), Cooper, C. (Creator), Davidson, R. (Creator), Parks, J. (Creator), Urbanowicz, B. (Creator), Tuskan, G. (Creator), Joshi, T. (Creator), Dixon, R. (Creator), Muchero, W. (Creator) & Barros, J. (Creator), Oak Ridge National Laboratory (ORNL), Oak Ridge, TN (United States), 2025
DOI: 10.25983/2522827
Dataset
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SARS-CoV2 Docking Dataset
Rogers, D. (Creator), Glaser, J. (Creator), Agarwal, R. (Creator), Vermaas, J. (Creator), Smith, M. D. (Creator), Parks, J. (Creator), Cooper, C. J. (Creator), Sedova, A. (Creator), Boehm, S. (Creator), Baker, M. (Creator) & Smith, J. (Creator), Constellation by Oak Ridge Leadership Computing Facility (OLCF), May 27 2021
Dataset