Projects per year
Overview
Education/Academic qualification
Med-Biomed Sciences, Doctorate Degree
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- 1 Similar Profiles
Researcher collaborations from the last five years
Projects
- 1 Finished
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High throughput, accurate gene annotation through AI and HPC-enabled structural analysis
Skolnick, J. (PI), Cheng, J. (CoPI), Sedova, A. (CoPI) & Parks, J. (CoPI)
Biological and Environmental Research
09/15/20 → 09/14/23
Project: Research
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Robustness of Deep Learning Classification to Adversarial Input on GPUs: Asynchronous Parallel Accumulation Is a Source of Vulnerability
Shanmugavelu, S., Taillefumier, M., Culver, C., Ganesh, V., Hernandez, O. & Sedova, A., 2026, Euro-Par 2025: Parallel Processing - 31st European Conference on Parallel and Distributed Processing, Proceedings. Nagel, W. E., Goehringer, D. & Diniz, P. C. (eds.). Springer Science and Business Media Deutschland GmbH, p. 306-320 15 p. (Lecture Notes in Computer Science; vol. 15901 LNCS).Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review
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Engineered enzymatic cascade converts diols to amino alcohols
Valentino, H. R., Qian, L., Parks, J. M., Drufva, E. E., Sedova, A., Mehta, P. S., Watson, M. P., Giannone, R. J., Galanie, S. S. & Michener, J. K., May 6 2025, In: Green Chemistry. 27, 21, p. 6283-6292 10 p.Research output: Contribution to journal › Article › peer-review
Open Access -
Identification and characterization of substrate- and product-selective nylon hydrolases
Drufva, E. E., Cahill, J. F., Saint-Vincent, P. M. B., Williams, A. N., Bocharova, V., Capra, N., Meilleur, F., Carper, D. L., Bourgery, C., Miyazaki, K., Yonemura, M., Shiraishi, Y., Parks, J. M., Zhou, M., Dishner, I. T., Foster, J. C., Koehler, S. J., Valentino, H. R., Sedova, A. & Kertesz, V. & 7 others, , Aug 21 2025, In: Chem Catalysis. 5, 8, 101418.Research output: Contribution to journal › Article › peer-review
2 Scopus citations -
Deep-Learning Interatomic Potential Connects Molecular Structural Ordering to the Macroscale Properties of Polyacrylonitrile
Chahal, R., Toomey, M. D., Kearney, L. T., Sedova, A., Damron, J. T., Naskar, A. K. & Roy, S., Jul 17 2024, In: ACS Applied Materials and Interfaces. 16, 28, p. 36878-36891 14 p.Research output: Contribution to journal › Article › peer-review
6 Scopus citations -
Impacts of floating-point non-associativity on reproducibility for HPC and deep learning applications
Shanmugavelu, S., Taillefumier, M., Culver, C., Hernandez, O., Coletti, M. & Sedova, A., 2024, Proceedings of SC 2024-W: Workshops of the International Conference for High Performance Computing, Networking, Storage and Analysis. Institute of Electrical and Electronics Engineers Inc., p. 170-179 10 p. (Proceedings of SC 2024-W: Workshops of the International Conference for High Performance Computing, Networking, Storage and Analysis).Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review
3 Scopus citations
Datasets
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Proteome-scale Structure Prediction Data - Pseudodesulfovibrio mercurii
Davidson, R. B. (Creator), Coletti, M. (Creator), Gao, M. (Creator), Parks, J. (Creator) & Sedova, A. (Creator), Oak Ridge National Laboratory (ORNL), Oak Ridge, TN (United States). Oak Ridge Leadership Computing Facility (OLCF); Oak Ridge National Laboratory (ORNL), Oak Ridge, TN (United States), Apr 11 2022
DOI: 10.13139/ORNLNCCS/1861307
Dataset
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Structural Models and Sequence Alignment Results of the Rhodospirillum rubrum Proteome
Davidson, R. B. (Creator), Coletti, M. (Creator), Gao, M. (Creator) & Sedova, A. (Creator), Oak Ridge National Laboratory (ORNL), Oak Ridge, TN (United States). Oak Ridge Leadership Computing Facility (OLCF); Oak Ridge National Laboratory (ORNL), Oak Ridge, TN (United States), Jul 7 2023
DOI: 10.13139/ORNLNCCS/1987876
Dataset
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Structural Models and Sequence Alignment Results of the Desulfovibrio vulgaris Proteome
Davidson, R. B. (Creator), Coletti, M. (Creator), Gao, M. (Creator) & Sedova, A. (Creator), Oak Ridge National Laboratory (ORNL), Oak Ridge, TN (United States). Oak Ridge Leadership Computing Facility (OLCF); Oak Ridge National Laboratory (ORNL), Oak Ridge, TN (United States), Jul 12 2023
DOI: 10.13139/ORNLNCCS/1988139
Dataset
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SARS-CoV2 Docking Dataset
Rogers, D. (Creator), Glaser, J. (Creator), Agarwal, R. (Creator), Vermaas, J. (Creator), Smith, M. D. (Creator), Parks, J. (Creator), Cooper, C. J. (Creator), Sedova, A. (Creator), Boehm, S. (Creator), Baker, M. (Creator) & Smith, J. (Creator), Oak Ridge National Laboratory (ORNL), Oak Ridge, TN (United States). Oak Ridge Leadership Computing Facility (OLCF); Oak Ridge National Laboratory (ORNL), Oak Ridge, TN (United States), May 27 2021
Dataset
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Structural models and functional annotations for the Sphagnum divinum proteome.
Davidson, R. B. (Creator), Coletti, M. (Creator), Gao, M. (Creator) & Sedova, A. (Creator), Oak Ridge National Laboratory (ORNL), Oak Ridge, TN (United States). Oak Ridge Leadership Computing Facility (OLCF); Oak Ridge National Laboratory (ORNL), Oak Ridge, TN (United States), May 31 2023
DOI: 10.13139/ORNLNCCS/1973885
Dataset