Projects per year
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Dive into the research topics where Computational and Predictive Biology is active. These topic labels come from the works of this organization's members. Together they form a unique fingerprint.
Researcher collaborations from the last five years
Based on publications and projects (not datasets). Dive into details by clicking on the dots or
Profiles
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Chanaka Abeyratne
- Computational and Predictive Biology - Postdoctoral Research Associate - Comput
Person
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Fibroblast dysregulation promotes dermal eosinophilic/Th2 inflammation
Graves, D. D. T. (PI), Jacobson, D. (CoPI), Seykora, J. T. (CoPI) & Ko, K. I. (CoPI)
National Institute of Arthritis and Musculoskeletal and Skin Diseases
09/21/23 → 08/31/25
Project: Research
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Multi-omics Gene Network Identification (Project 4)
Jacobson, D. (PI)
National Institute on Drug Abuse
06/1/23 → 05/31/25
Project: Research
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Integrative Omics Center for Accelerating Neurobiological Understanding of Opioid Addiction (ICAN)
Johnson, E. E. O. (PI), Jacobson, D. (CoPI), Scacheri, P. P. C. (CoPI) & Troiani, V. V. (CoPI)
09/15/22 → 05/31/25
Project: Research
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Multiomic Network Analysis Identifies Dysregulated Neurobiological Pathways in Opioid Addiction
Sullivan, K. A., Kainer, D., Lane, M., Cashman, M., Miller, J. I., Garvin, M. R., Townsend, A., Quach, B. C., Willis, C., Kruse, P., Gaddis, N. C., Mathur, R., Corradin, O., Maher, B. S., Scacheri, P. C., Sanchez-Roige, S., Palmer, A. A., Troiani, V., Chesler, E. J. & Kember, R. L. & 6 others, , 2025, (Accepted/In press) In: Biological Psychiatry.Research output: Contribution to journal › Article › peer-review
Open Access -
Natural variation in growth and yield to waterlogging across climate-diverse pennycress accessions
Combs-Giroir, R., Lagergren, J., Jacobson, D. A. & Gschwend, A. R., 2025, In: Journal of Plant Interactions. 20, 1, 2455414.Research output: Contribution to journal › Article › peer-review
Open Access -
Advances in the Application of Single-Cell Transcriptomics in Plant Systems and Synthetic Biology
Islam, M. T., Liu, Y., Hassan, M. M., Abraham, P. E., Merlet, J., Townsend, A., Jacobson, D., Buell, C. R., Tuskan, G. A. & Yang, X., 2024, In: BioDesign Research. 6, 0029.Research output: Contribution to journal › Review article › peer-review
Open Access9 Scopus citations
Datasets
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Moab Desert Crust - Sample 4E
Chivian, D. (Creator), Jungbluth, S. P. (Creator), Dehal, P. (Creator), Wood-Charlson, E. M. (Creator), Canon, R. S. (Creator), Allen, B. (Creator), Clark, M. M. (Creator), Gu, T. (Creator), Land, M. L. (Creator), Price, G. A. (Creator), Riehl, W. J. (Creator), Sneddon, M. W. (Creator), Sutormin, R. A. (Creator), Zhang, Q. (Creator), Cottingham Jr, R. (Creator), Henry, C. S. (Creator) & Arkin, A. P. (Creator), DOE Systems Biology Knowledgebase (KBase), Nov 13 2021
DOI: 10.25982/62384.253/1831503
Dataset
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Genome Extraction from Shotgun Metagenome Sequence Data
Chivian, D. (Creator), Jungbluth, S. P. (Creator), Dehal, P. (Creator), Canon, R. S. (Creator), Allen, B. (Creator), Clark, M. M. (Creator), Gu, T. (Creator), Land, M. L. (Creator), Price, G. A. (Creator), Riehl, W. J. (Creator), Sneddon, M. W. (Creator), Sutormin, R. A. (Creator), Zhang, Q. (Creator), Cottingham Jr, R. (Creator), Henry, C. S. (Creator) & Arkin, A. P. (Creator), DOE Systems Biology Knowledgebase (KBase), Nov 9 2021
DOI: 10.25982/33233.606/1831502
Dataset
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Supporting information for "Few-Shot Learning Enables Population-Scale Analysis of Leaf Traits in Populus trichocarpa"
Lagergren, J. (Creator), Pavicic Venegas, M. (Creator), Chhetri, H. (Creator), York, L. (Creator), Hyatt, D. (Creator), Kainer, D. (Creator), Rutter, E. M. (Creator), Flores, K. (Creator), Taylor, G. (Creator), Jacobson, D. (Creator) & Streich, J. (Creator), Constellation by Oak Ridge Leadership Computing Facility (OLCF), Jan 26 2023
DOI: 10.13139/ORNLNCCS/1908723
Dataset