Projects per year
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Dive into the research topics where Biosystems Imaging and Characterization is active. These topic labels come from the works of this organization's members. Together they form a unique fingerprint.
Researcher collaborations from the last five years
Based on publications and projects (not datasets). Dive into details by clicking on the dots or
Profiles
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Shane Franklin
- Biosystems Imaging and Characterization - Postdoctoral Research Associate - Engine
Person
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Systems Biology and Adaptation in Switchgrass: Discovering Mechanisms Underlying Plant-Microbe-Soil Interactions and Abiotic Stress Tolerance
York, L. (PI)
Biological and Environmental Research
09/1/25 → 08/31/30
Project: Research
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Systems Biology and Adaptation in Switchgrass: Discovering Mechanisms Underlying Plant-Microbe-Soil Interactions and Abiotic Stress Tolerance
Juenger, T. E. (PI), Bartley, L. E. (CoPI), Edwards, J. J. (CoPI), Fritschi, F. B. (CoPI), Lowry, D. D. (CoPI), Schmutz, J. (CoPI), Swaminathan, K. (CoPI), York, L. (CoPI) & Zare, A. (CoPI)
Biological and Environmental Research
09/1/25 → 08/31/30
Project: Research
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Using entangled two-photon absorption to image bacterial organization and responses in the rhizosphere
Iii, T. G. T. G. (PI), Schatz, G. C. (PI), Morrell-Falvey, J. (PI) & Ma, Y. (CoPI)
Biological and Environmental Research
02/1/25 → 01/31/28
Project: Research
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A Fourier-based global denoising model for the smart removal of artifacts in microscopy images
Zhao, H., Vernachio, C., Bhurtel, L., Yang, W., Millan-Solsona, R., Brown, S. R., Checa, M., Agrawal, K. S., Guss, A. M., Collins, L., Ko, W. & Biswas, A., Aug 2026, In: Machine Learning: Science and Technology. 7, 4, 045034.Research output: Contribution to journal › Article › peer-review
Open Access -
A systematic comparison of transformers and ConvNets for root segmentation across nine datasets
Smith, A. G., Lamprinidis, S., Seethepalli, A., York, L. M., Han, E., Möhl, P., Boulata, K., Thorup-Kristensen, K. & Petersen, J., Dec 2026, In: Plant Methods. 22, 1, 52.Research output: Contribution to journal › Article › peer-review
Open Access -
A Versatile Method for Creating Ultrathin Films of Polyzwitterions with Antifouling Properties
Maladeniya, C., Brown, S. R., Millan-Solsona, R., Blake, M. J., Keum, J. K., Meyer, H. M., Morrell-Falvey, J. L., Checa, M., Doughty, B., Ivanov, I. N., Collins, L., Kumar, R., Retterer, S. T., Advincula, R. C. & Christakopoulos, P., Apr 8 2026, In: ACS Applied Materials and Interfaces. 18, 13, p. 19509-19524 16 p.Research output: Contribution to journal › Article › peer-review
1 Scopus citations
Datasets
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Supporting information for "Few-Shot Learning Enables Population-Scale Analysis of Leaf Traits in Populus trichocarpa"
Lagergren, J. (Creator), Pavicic Venegas, M. (Creator), Chhetri, H. (Creator), York, L. (Creator), Hyatt, D. (Creator), Kainer, D. (Creator), Rutter, E. M. (Creator), Flores, K. (Creator), Taylor, G. (Creator), Jacobson, D. (Creator) & Streich, J. (Creator), Oak Ridge National Laboratory (ORNL), Oak Ridge, TN (United States). Oak Ridge Leadership Computing Facility (OLCF); Oak Ridge National Laboratory (ORNL), Oak Ridge, TN (United States), Jan 26 2023
DOI: 10.13139/ORNLNCCS/1908723
Dataset
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Dataset for Top Model Decision Tree: Selecting Segmentation Models for Reliable Quantitative Analysis in Low- and Ultralow-Dose CryoEM
Massenburg, L. (Creator), Madugula, S. (Creator), Brown, S. (Creator), Webb, A. (Creator), Harris, C. (Creator), Zhang, L. (Creator), Parker, K. (Creator), Retterer, S. (Creator), Morrell-Falvey, J. (Creator), Vasudevan, R. (Creator) & Williams, A. (Creator), Oak Ridge National Laboratory (ORNL), Oak Ridge, TN (United States), 2026
DOI: 10.13139/ornlnccs/3025228
Dataset