Biosciences Division

Search results

• Root image collection from a genotype by environment (GxE) root architecture study of the bioenergy species, Populus trichocarpa

  Kalluri, U. (Creator), McLennan, M. (Creator), Jawdy, S. (Creator), Sparks, S. (Creator), Clark, M. (Creator) & Martin, S. (Creator), Oak Ridge National Laboratory (ORNL), Oak Ridge, TN (United States), Jan 21 2022

  DOI: 10.25983/1841375

  Dataset

• Geographic coordinates of Populus Trichocarpa genets used in common gardens established and maintained by the Center for Bio energy Innovation. (CBI)

  DiFazio, S. (Creator), Slavov, G. (Creator), Gunter, L. (Creator), Yin, T. (Creator), Yang, X. (Creator), Engle, N. (Creator), Stanton, B. (Creator), Wullschleger, S. (Creator), Martin, S. (Creator) & Tuskan, G. (Creator), Oak Ridge National Laboratory (ORNL), Oak Ridge, TN (United States), Apr 13 2023

  DOI: 10.25983/1969513

  Dataset

• SPRUCE Photosynthesis and Respiration of Picea mariana and Larix laricina in SPRUCE Experimental Plots, 2016-2017

  Dusenge, M. E. (Creator), Ward, E. J. (Creator), Warren, J. (Creator), McLennan, M. (Creator), Stinziano, J. R. (Creator), Murphy, B. K. (Creator), King, A. W. (Creator), Brice, D. J. (Creator), Phillips, J. R. (Creator), Stefanski, A. (Creator), Villanueva, R. (Creator), Wullschleger, S. D. (Creator), Cruz, M. (Creator), Reich, P. B. (Creator) & Way, D. A. (Creator), SPRUCE, Mar 31 2020

  DOI: 10.25581/spruce.056/1455138

  Dataset

• Kraken2 Metagenomic Virus Database

  Garcia, B. J. (Creator), Simha, R. (Creator), Garvin, M. (Creator), Furches, A. (Creator), Jones, P. C. (Creator), Hyatt, P. D. (Creator), Schadt, C. (Creator), Pelletier, D. (Creator) & Jacobson, D. (Creator), Constellation by Oak Ridge Leadership Computing Facility (OLCF), Apr 23 2020

  DOI: 10.13139/OLCF/1615774

  Dataset

• El Verde Ridge, El Verde Valley, and Rio Icacos root phosphatase and bacterial community composition (December 2015)

  Cabugao, K. G. (Creator), Timm, C. M. (Creator), Carrell, A. (Creator), Childs, J. (Creator), Lu, T. Y. S. (Creator), Pelletier, D. (Creator), Weston, D. (Creator) & Norby, R. J. (Creator), Environmental System Science Data Infrastructure for a Virtual Ecosystem; Next-Generation Ecosystem Experiments (NGEE) Tropics, Jan 1 2018

  DOI: 10.15486/ngt/1419494

  Dataset

• Structural Models and Sequence Alignment Results of the Desulfovibrio vulgaris Proteome

  Davidson, R. B. (Creator), Coletti, M. (Creator), Gao, M. (Creator) & Sedova, A. (Creator), Constellation by Oak Ridge Leadership Computing Facility (OLCF), Jul 12 2023

  DOI: 10.13139/ORNLNCCS/1988139

  Dataset

• Structural Models of the Rhodopseudomonas palustris Proteome

  Davidson, R. B. (Creator), Coletti, M. (Creator), Gao, M. (Creator) & Sedova, A. (Creator), Constellation by Oak Ridge Leadership Computing Facility (OLCF), Jul 12 2023

  DOI: 10.13139/ORNLNCCS/1988165

  Dataset

• Genome sequencing of three representative oleaginous yeasts to better understand growth and lipid synthesis coupling

  Close, D. (Creator), The Genome Portal of the Department of Energy Joint Genome Institute (JGI), Sep 29 2014

  DOI: 10.25585/1487610

  Dataset

• SARS-CoV2 Docking Dataset

  Rogers, D. (Creator), Glaser, J. (Creator), Agarwal, R. (Creator), Vermaas, J. (Creator), Smith, M. D. (Creator), Parks, J. (Creator), Cooper, C. J. (Creator), Sedova, A. (Creator), Boehm, S. (Creator), Baker, M. (Creator) & Smith, J. (Creator), Constellation by Oak Ridge Leadership Computing Facility (OLCF), May 27 2021

  DOI: 10.13139/OLCF/1783186

  Dataset

• KBase Narrative - SOMATA - Motivating Example

  Cashman, M. (Creator), Marsh, A. L. (Creator), Cottingham Jr, R. (Creator) & Cohen, M. B. (Creator), DOE Systems Biology Knowledgebase (KBase), Feb 17 2023

  DOI: 10.25982/135473.103/1960315

  Dataset

• 2020 Soil Characterization measurements at Clatskanie and Corvallis, Oregon Populus Trichocarpa GWAS Populations

  Mayes, M. (Creator), Phillips, J. (Creator), Ottinger, S. (Creator), Fortner, A. (Creator), Dove, N. (Creator), Hopp, D. (Creator), Martin, S. (Creator) & Schadt, C. (Creator), Oak Ridge National Laboratory (ORNL), Oak Ridge, TN (United States), Nov 14 2023

  DOI: 10.25983/2205588

  Dataset

• SPRUCE Peat Mercury, Methylmercury and Sulfur Concentrations from Experimental Plot Cores, 2012

  Pierce, C. E. (Creator), Furman, O. S. (Creator), Tfaily, M. M. (Creator), Nicholas, S. (Creator), Wasik, J. C. (Creator), Gionfriddo, C. M. (Creator), Wymore, A. (Creator), Sebestyen, S. D. (Creator), Kolka, R. K. (Creator), Mitchell, C. P. J. (Creator), Griffiths, N. (Creator), Elias, D. A. (Creator), Nater, E. A. (Creator) & Toner, B. M. (Creator), SPRUCE, Jan 1 2023

  DOI: 10.3334/cdiac/spruce.027

  Dataset

• ORNL Compiled Mercury Methylator Database

  Gionfriddo, C. M. (Creator), Podar, M. (Creator), Gilmour, C. C. (Creator), Pierce, E. (Creator) & Elias, D. A. (Creator), ORNLMSFA (Oak Ridge National Lab's Mercury Critical Interfaces Scientific Focus Area (ORNL MSFA)), Oct 4 2019

  DOI: 10.12769/1569274

  Dataset

• Elemental profiling and genomewide association studies reveal genomic variants modulating ionomic composition in Populus trichocarpa leaves

  Ployet, R. (Creator), Feng, K. (Creator), Zhang, J. (Creator), Baxter, I. (Creator), Glasgow, D. (Creator), Andrews, H. (Creator), Rodriguez, M. (Creator), Chen, J. G. (Creator), Tuskan, G. (Creator), Tschaplinski, T. (Creator), Weston, D. (Creator), Martin, M. (Creator) & Muchero, W. (Creator), Oak Ridge National Laboratory (ORNL), Oak Ridge, TN (United States), Nov 18 2024

  DOI: 10.25983/2477696

  Dataset

• SPRUCE Sphagnum Phytobiome Responses to Whole Ecosystem Warming and Elevated Atmospheric CO2 in July, 2017-2021

  Petro, C. (Creator), Carrell, A. (Creator), Wilson, R. M. (Creator), Duchesneau, K. (Creator), Noble-Kuchera, S. (Creator), Song, T. (Creator), Iversen, C. (Creator), Childs, J. (Creator), Schwaner, G. (Creator), Chanton, J. (Creator), Norby, R. J. (Creator), Hanson, P. (Creator), Glass, J. B. (Creator), Weston, D. (Creator) & Kostka, J. E. (Creator), SPRUCE, Jan 1 2023

  DOI: 10.25581/spruce.105/1924666

  Dataset

• MOFLUX Intensified Soil Moisture Extremes Decrease Soil Organic Carbon Decomposition: Modeling Archive.

  Liang, J. (Creator), Wang, G. (Creator), Singh, S. (Creator), Jagadamma, S. (Creator), Gu, L. (Creator), Schadt, C. (Creator), Wood, J. D. (Creator), Hanson, P. (Creator) & Mayes, M. (Creator), ORNLTESSFA (Oak Ridge National Lab's Terrestrial Ecosystem Science Scientific Focus Area (ORNL TES SFA)), Jan 1 2021

  DOI: 10.25581/ornlsfa.023/1804106

  Dataset

• Five-year yield and physiology data for Populus deltoides grown in South Carolina

  Tuskan, G. (Creator), Wullschleger, S. D. (Creator), Hanson, P. (Creator), Cregger, M. (Creator), Field, J. (Creator), Sloan, B. (Creator), Cunningham, M. (Creator), Craig, B. M. (Creator), Rakestraw, J. L. (Creator) & Tschaplinski, T. (Creator), Oak Ridge National Laboratory (ORNL), Oak Ridge, TN (United States), Aug 1 2024

  DOI: 10.25983/2424801

  Dataset

• Evaluating the Performance of Random Forest and Iterative Random Forest Based Methods when Applied to Gene Expression Data

  Walker, A. M. (Creator), Cliff, A. (Creator), Romero, J. (Creator), Shah, M. B. (Creator), Jones, P. C. (Creator), Gazolla, J. G. F. M. (Creator), Jacobson, D. (Creator) & Kainer, D. (Creator), Oak Ridge National Laboratory (ORNL), Oak Ridge, TN (United States), Jun 9 2022

  DOI: 10.25983/1871691

  Dataset

• Belowground respiration, root traits, and soil characteristics of an East Tennessee deciduous forest, 2019-2020

  Hogan, J. A. (Creator), Labbé, J. L. (Creator), Carrell, A. (Creator), Franklin, J. (Creator), Hoyt, K. P. (Creator), Valverde-Barrantes, O. J. (Creator), Baraloto, C. (Creator) & Warren, J. (Creator), ORNLTESSFA (Oak Ridge National Lab's Terrestrial Ecosystem Science Scientific Focus Area (ORNL TES SFA)), Jan 1 2022

  DOI: 10.25581/ornlsfa.025/1838660

  Dataset

• Structural models and functional annotations for the Sphagnum divinum proteome.

  Davidson, R. B. (Creator), Coletti, M. (Creator), Gao, M. (Creator) & Sedova, A. (Creator), Constellation by Oak Ridge Leadership Computing Facility (OLCF), May 31 2023

  DOI: 10.13139/ORNLNCCS/1973885

  Dataset

• OpenMDlr Dataset

  Davidson, R. B. (Creator) & Sedova, A. (Creator), Constellation by Oak Ridge Leadership Computing Facility (OLCF), May 12 2022

  DOI: 10.13139/ORNLNCCS/1866593

  Dataset

• Structural Models and Sequence Alignment Results of the Rhodospirillum rubrum Proteome

  Davidson, R. B. (Creator), Coletti, M. (Creator), Gao, M. (Creator) & Sedova, A. (Creator), Constellation by Oak Ridge Leadership Computing Facility (OLCF), Jul 7 2023

  DOI: 10.13139/ORNLNCCS/1987876

  Dataset

• Expression Quantitative Trait Nucleotides Mapping in Populus trichocarpa

  Chen, J. (Creator), The Genome Portal of the Department of Energy Joint Genome Institute (JGI), Mar 9 2015

  DOI: 10.25585/1487619

  Dataset

• Supporting data for climatic clustering and longitudinal analysis with impacts on food, bioenergy, and pandemics

  Lagergren, J. (Creator), Cashman, M. (Creator), Melesse Vergara, V. (Creator), Eller, P. R. (Creator), Felipe Machado Gazolla, J. G. (Creator), Chhetri, H. (Creator), Streich, J. (Creator), Climer, S. (Creator), Thornton, P. (Creator), Joubert, W. (Creator) & Jacobson, D. (Creator), Constellation by Oak Ridge Leadership Computing Facility (OLCF), Nov 18 2021

  DOI: 10.13139/ORNLNCCS/1828678

  Dataset

• The moderately defficient enzyme: Catalysis-related damage in vivo and its repair

  Henry, C. S. (Creator), Wilson, M. A. (Creator), Hanson, A. D. (Creator), Abraham, P. (Creator), Leong, B. J. (Creator), McCarty, D. R. (Creator) & Bathe, U. (Creator), DOE Systems Biology Knowledgebase (KBase), Nov 2 2021

  DOI: 10.25982/95771.20/1828591

  Dataset