Biological and Environmental Systems Sci

2024

3D printing synthesis of catalysts

Zhao, X., Karakaya, C., Qian, M., Zou, R., Zhang, W., Lu, Z., Maiti, D., Samanta, A., Wan, W., Liu, X., Tiplea, A., Li, Y., Cui, S., Wang, C., Lei, H., Bankston, S., Yilmaz, S., Chen, J. G. & Ozcan, S., Jun 2024, In: Materials Today Sustainability. 26, 100746.

Research output: Contribution to journal › Review article › peer-review

3 Scopus citations

Advances in the Application of Single-Cell Transcriptomics in Plant Systems and Synthetic Biology

Islam, M. T., Liu, Y., Hassan, M. M., Abraham, P. E., Merlet, J., Townsend, A., Jacobson, D., Buell, C. R., Tuskan, G. A. & Yang, X., 2024, In: BioDesign Research. 6, 0029.

Research output: Contribution to journal › Review article › peer-review

Open Access

3 Scopus citations

Aerosol-Cloud Interactions From Aviation Soot Emissions

Alsante, A. N. & Cheng, M. D., Jun 28 2024, In: Journal of Geophysical Research: Atmospheres. 129, 12, e2023JD040277.

Research output: Contribution to journal › Review article › peer-review

An emerging multi-omic understanding of the genetics of opioid addiction

Johnson, E. O., Fisher, H. S., Sullivan, K. A., Corradin, O., Sanchez-Roige, S., Gaddis, N. C., Sami, Y. N., Townsend, A., Teixeira Prates, E., Pavicic, M., Kruse, P., Chesler, E. J., Palmer, A. A., Troiani, V., Bubier, J. A., Jacobson, D. A. & Maher, B. S., Oct 15 2024, In: Journal of Clinical Investigation. 134, 20

Research output: Contribution to journal › Review article › peer-review

Open Access

Application of functional genomics for domestication of novel non-model microbes

Bales, M. K., Vergara, M. M. & Eckert, C. A., 2024, In: Journal of Industrial Microbiology and Biotechnology. 51, kuae022.

Research output: Contribution to journal › Review article › peer-review

Open Access

A review of antimicrobial implications for improving indoor air quality

Jiang, H., Muneeshwaran, M., Liu, X., An, K., Zhao, X., Ozcan, S., Aytug, T., Li, K. & Nawaz, K., Aug 2024, In: Journal of Materials Science. 59, 30, p. 13725-13755 31 p.

Research output: Contribution to journal › Review article › peer-review

Biomass-derived carbon dots as emerging visual platforms for fluorescent sensing

Yuan, L., Shao, C., Zhang, Q., Webb, E., Zhao, X. & Lu, S., Jun 15 2024, In: Environmental Research. 251, 118610.

Research output: Contribution to journal › Review article › peer-review

13 Scopus citations

Biotechnology and Genomic Approaches to Mitigating Disease Impacts on Forest Health

LeBoldus, J. M., Lynch, S. C., Newhouse, A. E., Søndreli, K. L., Newcombe, G., Bennett, P. I., Muchero, W., Chen, J. G., Busby, P. E., Gordon, M. & Liang, H., Sep 9 2024, In: Annual Review of Phytopathology. 62, 1, p. 309-335 27 p.

Research output: Contribution to journal › Review article › peer-review

Constraints and Drivers of Dissolved Fluxes of Pyrogenic Carbon in Soil and Freshwater Systems: A Global Review and Meta-Analysis

Abney, R. B., Barnes, M. E., Moss, A. & Santos, F., Jun 2024, In: Global Biogeochemical Cycles. 38, 6, e2023GB008092.

Research output: Contribution to journal › Review article › peer-review

Open Access

1 Scopus citations

Insights into activators on biomass-derived carbon-based composites for electrochemical energy storage

Lu, S., Fang, L., Wang, X., Xiaoteng Liu, T., Zhao, X., Xu, B. B., Hua, Q. & Liu, H., Apr 2024, In: Materials Today Chemistry. 37, 101988.

Research output: Contribution to journal › Review article › peer-review

7 Scopus citations

Intensified Positive Arctic–Methane Feedback under IPCC Climate Scenarios in the 21st Century

Wang, Y., He, L., Liu, J., Arndt, K. A., Mazza Rodrigues, J. L., Zona, D., Lipson, D. A., Oechel, W. C., Ricciuto, D. M., Wullschleger, S. D. & Xu, X., 2024, In: Ecosystem Health and Sustainability. 10, 0185.

Research output: Contribution to journal › Review article › peer-review

Open Access

Lignin-based vitrimers: valorization and utilization of lignin in high-value applications

Karoki, P. K., Zhang, S., Pu, Y. & Ragauskas, A. J., 2024, (Accepted/In press) In: Materials Advances.

Research output: Contribution to journal › Review article › peer-review

Open Access

Modeling exports of dissolved organic carbon from landscapes: a review of challenges and opportunities

Wei, X., Hayes, D. J., Butman, D. E., Qi, J., Ricciuto, D. M. & Yang, X., May 1 2024, In: Environmental Research Letters. 19, 5, 053001.

Research output: Contribution to journal › Review article › peer-review

Open Access

Soil application of high-lignin fermentation byproduct to increase the sustainability of liquid biofuel production from crop residues

Lynd, L., Kemanian, A. R., Smith, J., Richard, T. L., Arifi, A., Bozzetto, S., Fabbri, C., Field, J., Pries, C. H., Kubis, M., Smith, P., Wang, M. & Hoey, M., Aug 1 2024, In: Environmental Research Letters. 19, 8, 083002.

Research output: Contribution to journal › Review article › peer-review

Open Access

Systemic stomatal responses in plants: Coordinating development, stress, and pathogen defense under a changing climate

Peláez-Vico, M. Á., Zandalinas, S. I., Devireddy, A. R., Sinha, R. & Mittler, R., Apr 2024, In: Plant Cell and Environment. 47, 4, p. 1171-1184 14 p.

Research output: Contribution to journal › Review article › peer-review

4 Scopus citations

The State of the Art in Root System Architecture Image Analysis Using Artificial Intelligence: A Review

Weihs, B. J., Heuschele, D. J., Tang, Z., York, L. M., Zhang, Z. & Xu, Z., Jan 2024, In: Plant Phenomics. 6, 0178.

Research output: Contribution to journal › Review article › peer-review

Open Access

3 Scopus citations

Three Decades of Wetland Methane Surface Flux Modeling by Earth System Models-Advances, Applications, and Challenges

Forbrich, I., Yazbeck, T., Sulman, B., Morin, T. H., Tang, A. C. I. & Bohrer, G., Mar 2024, In: Journal of Geophysical Research: Biogeosciences. 129, 3, e2023JG007915.

Research output: Contribution to journal › Review article › peer-review

Open Access

1 Scopus citations

Tropical root responses to global changes: A synthesis

Yaffar, D., Lugli, L. F., Wong, M. Y., Norby, R. J., Addo-Danso, S. D., Arnaud, M., Cordeiro, A. L., Dietterich, L. H., Diaz-Toribio, M. H., Lee, M. Y., Ghimire, O. P., Smith-Martin, C. M., Toro, L., Andersen, K., McCulloch, L. A., Meier, I. C., Powers, J. S., Sanchez-Julia, M., Soper, F. M. & Cusack, D. F., Jul 2024, In: Global Change Biology. 30, 7, e17420.

Research output: Contribution to journal › Review article › peer-review

Open Access

1 Scopus citations

Wildfire smoke impacts lake ecosystems

Farruggia, M. J., Brahney, J., Tanentzap, A. J., Brentrup, J. A., Brighenti, L. S., Chandra, S., Cortés, A., Fernandez, R. L., Fischer, J. M., Forrest, A. L., Jin, Y., Larrieu, K., McCullough, I. M., Oleksy, I. A., Pilla, R. M., Rusak, J. A., Scordo, F., Smits, A. P., Symons, C. C. & Tang, M. & 2 others, Woodman, S. G. & Sadro, S., Jun 2024, In: Global Change Biology. 30, 6, e17367.

Research output: Contribution to journal › Review article › peer-review

Open Access

2023

Accounting for herbaceous communities in process-based models will advance our understanding of “grassy” ecosystems

Wilcox, K. R., Chen, A., Avolio, M. L., Butler, E. E., Collins, S., Fisher, R., Keenan, T., Kiang, N. Y., Knapp, A. K., Koerner, S. E., Kueppers, L., Liang, G., Lieungh, E., Loik, M., Luo, Y., Poulter, B., Reich, P., Renwick, K., Smith, M. D. & Walker, A. & 2 others, Weng, E. & Komatsu, K. J., Dec 2023, In: Global Change Biology. 29, 23, p. 6453-6477 25 p.

Research output: Contribution to journal › Review article › peer-review

Open Access

2 Scopus citations

Applications of biomass-derived solvents in biomass pretreatment – Strategies, challenges, and prospects

Meng, X., Wang, Y., Conte, A. J., Zhang, S., Ryu, J., Wie, J. J., Pu, Y., Davison, B. H., Yoo, C. G. & Ragauskas, A. J., Jan 2023, In: Bioresource Technology. 368, 128280.

Research output: Contribution to journal › Review article › peer-review

Open Access

28 Scopus citations

A primer on artificial intelligence in plant digital phenomics: embarking on the data to insights journey

Harfouche, A. L., Nakhle, F., Harfouche, A. H., Sardella, O. G., Dart, E. & Jacobson, D., Feb 2023, In: Trends in Plant Science. 28, 2, p. 154-184 31 p.

Research output: Contribution to journal › Review article › peer-review

Open Access

20 Scopus citations

Beyond Pristine Metal–Organic Frameworks: Preparation of Hollow MOFs and Their Composites for Catalysis, Sensing, and Adsorption Removal Applications

Zha, X., Zhao, X., Webb, E., Khan, S. U. & Wang, Y., Jan 2023, In: Molecules. 28, 1, 144.

Research output: Contribution to journal › Review article › peer-review

Open Access

16 Scopus citations

Bioinspired design toward nanocellulose-based materials

Zhao, X., Bhagia, S., Gomez-Maldonado, D., Tang, X., Wasti, S., Lu, S., Zhang, S., Parit, M., Rencheck, M. L., Korey, M., Jiang, H., Zhu, J., Meng, X., Lamm, M. E., Copenhaver, K., Peresin, M. S., Wang, L., Tekinalp, H., Yang, G. & Kumar, V. & 11 others, Chen, G., Nawaz, K., Chelsea Chen, X., Vaidya, U., Ragauskas, A. J., Webb, E., Gardner, D. J., He, P., He, X., Li, K. & Ozcan, S., Jun 2023, In: Materials Today. 66, p. 409-430 22 p.

Research output: Contribution to journal › Review article › peer-review

Open Access

34 Scopus citations

From remotely sensed solar-induced chlorophyll fluorescence to ecosystem structure, function, and service: Part I—Harnessing theory

Sun, Y., Gu, L., Wen, J., van der Tol, C., Porcar-Castell, A., Joiner, J., Chang, C. Y., Magney, T., Wang, L., Hu, L., Rascher, U., Zarco-Tejada, P., Barrett, C. B., Lai, J., Han, J. & Luo, Z., Jun 2023, In: Global Change Biology. 29, 11, p. 2926-2952 27 p.

Research output: Contribution to journal › Review article › peer-review

Open Access

33 Scopus citations

From remotely-sensed solar-induced chlorophyll fluorescence to ecosystem structure, function, and service: Part II—Harnessing data

Sun, Y., Wen, J., Gu, L., Joiner, J., Chang, C. Y., van der Tol, C., Porcar-Castell, A., Magney, T., Wang, L., Hu, L., Rascher, U., Zarco-Tejada, P., Barrett, C. B., Lai, J., Han, J. & Luo, Z., Jun 2023, In: Global Change Biology. 29, 11, p. 2893-2925 33 p.

Research output: Contribution to journal › Review article › peer-review

Open Access

31 Scopus citations

Multifunctional polymer composite coatings and adhesives by incorporating cellulose nanomaterials

Wang, L., Kelly, P. V., Ozveren, N., Zhang, X., Korey, M., Chen, C., Li, K., Bhandari, S., Tekinalp, H., Zhao, X., Wang, J., Seydibeyoğlu, M. Ö., Alyamac-Seydibeyoglu, E., Gramlich, W. M., Tajvidi, M., Webb, E., Ozcan, S. & Gardner, D. J., Feb 1 2023, In: Matter. 6, 2, p. 344-372 29 p.

Research output: Contribution to journal › Review article › peer-review

Open Access

23 Scopus citations

Plant Promoters and Terminators for High-Precision Bioengineering

Brooks, E. G., Elorriaga, E., Liu, Y., Duduit, J. R., Yuan, G., Tsai, C. J., Tuskan, G. A., Ranney, T. G., Yang, X. & Liu, W., 2023, In: BioDesign Research. 5, e0013.

Research output: Contribution to journal › Review article › peer-review

Open Access

16 Scopus citations

Review on Hybrid Reinforced Polymer Matrix Composites with Nanocellulose, Nanomaterials, and Other Fibers

Seydibeyoğlu, M. Ö., Dogru, A., Wang, J., Rencheck, M., Han, Y., Wang, L., Seydibeyoğlu, E. A., Zhao, X., Ong, K., Shatkin, J. A., Shams Es-haghi, S., Bhandari, S., Ozcan, S. & Gardner, D. J., Feb 2023, In: Polymers. 15, 4, 984.

Research output: Contribution to journal › Review article › peer-review

Open Access

42 Scopus citations

Root phenotypes for improved nitrogen capture

Lynch, J. P., Galindo-Castañeda, T., Schneider, H. M., Sidhu, J. S., Rangarajan, H. & York, L. M., 2023, (Accepted/In press) In: Plant and Soil.

Research output: Contribution to journal › Review article › peer-review

Open Access

13 Scopus citations

Sustainable bioplastics derived from renewable natural resources for food packaging

Zhao, X., Wang, Y., Chen, X., Yu, X., Li, W., Zhang, S., Meng, X., Zhao, Z. M., Dong, T., Anderson, A., Aiyedun, A., Li, Y., Webb, E., Wu, Z., Kunc, V., Ragauskas, A., Ozcan, S. & Zhu, H., Jan 4 2023, In: Matter. 6, 1, p. 97-127 31 p.

Research output: Contribution to journal › Review article › peer-review

Open Access

60 Scopus citations

The significance of biomass densification in biological-based biorefineries: A critical review

Gong, C., Meng, X., Thygesen, L. G., Sheng, K., Pu, Y., Wang, L., Ragauskas, A., Zhang, X. & Thomsen, S. T., Sep 2023, In: Renewable and Sustainable Energy Reviews. 183, 113520.

Research output: Contribution to journal › Review article › peer-review

Open Access

20 Scopus citations

Towards functionalized lignin and its derivatives for high-value material applications

Yu, X., Yang, B., Zhu, W., Deng, T., Pu, Y., Ragauskas, A. & Wang, H., Sep 15 2023, In: Industrial Crops and Products. 200, 116824.

Research output: Contribution to journal › Review article › peer-review

Open Access

23 Scopus citations

Towards the applications of mechanophore incorporated feedstocks for additive manufacturing

Rencheck, M. L., Korey, M., Zhao, X., Tekinalp, H. & Ozcan, S., Mar 2023, In: Materials Today Communications. 34, 105525.

Research output: Contribution to journal › Review article › peer-review

Open Access

1 Scopus citations

Understanding How Reservoir Operations Influence Methane Emissions: A Conceptual Model

Jager, H. I., Pilla, R. M., Hansen, C. H., Matson, P. G., Iftikhar, B. & Griffiths, N. A., Dec 2023, In: Water (Switzerland). 15, 23, 4112.

Research output: Contribution to journal › Review article › peer-review

Open Access

1 Scopus citations

Valorization of homogeneous linear catechyl lignin: opportunities and challenges

Li, Y., Meng, X., Meng, R., Cai, T., Pu, Y., Zhao, Z. M. & Ragauskas, A. J., Apr 24 2023, In: RSC Advances. 13, 19, p. 12750-12759 10 p.

Research output: Contribution to journal › Review article › peer-review

Open Access

17 Scopus citations

Viral infections likely mediate microbial controls on ecosystem responses to global warming

Wieczynski, D. J., Yoshimura, K. M., Denison, E. R., Geisen, S., Debruyn, J. M., Shaw, A. J., Weston, D. J., Pelletier, D. A., Wilhelm, S. W. & Gibert, J. P., Mar 1 2023, In: FEMS Microbiology Ecology. 99, 3, fiad016.

Research output: Contribution to journal › Review article › peer-review

Open Access

3 Scopus citations

2022

A million persons, a million dreams: a vision for a national center of radiation epidemiology and biology

Boice, J. D., Quinn, B., Al-Nabulsi, I., Ansari, A., Blake, P. K., Blattnig, S. R., Caffrey, E. A., Cohen, S. S., Golden, A. P., Held, K. D., Jokisch, D. W., Leggett, R. W., Mumma, M. T., Samuels, C., Till, J. E., Tolmachev, S. Y., Yoder, R. C., Zhou, J. Y. & Dauer, L. T., 2022, In: International Journal of Radiation Biology. 98, 4, p. 795-821 27 p.

Research output: Contribution to journal › Review article › peer-review

Open Access

30 Scopus citations

Anthropogenically driven climate and landscape change effects on inland water carbon dynamics: What have we learned and where are we going?

Pilla, R. M., Griffiths, N. A., Gu, L., Kao, S. C., McManamay, R., Ricciuto, D. M. & Shi, X., Oct 2022, In: Global Change Biology. 28, 19, p. 5601-5629 29 p.

Research output: Contribution to journal › Review article › peer-review

Open Access

36 Scopus citations

Biological and Molecular Components for Genetically Engineering Biosensors in Plants

Liu, Y., Yuan, G., Hassan, M. M., Abraham, P. E., Mitchell, J. C., Jacobson, D., Tuskan, G. A., Khakhar, A., Medford, J., Zhao, C., Liu, C. J., Eckert, C. A., Doktycz, M. J., Tschaplinski, T. J. & Yang, X., 2022, In: BioDesign Research. 2022, 9863496.

Research output: Contribution to journal › Review article › peer-review

Open Access

5 Scopus citations

Deuterium incorporation into cellulose: a mini-review of biological and chemical methods

Song, Y., Meng, X., Jiang, W., Evans, B. R., Ben, H., Zhang, Y., Pu, Y., Pingali, S. V., Davison, B. H., Zhang, S., Han, G. & Ragauskas, A. J., May 2022, In: Cellulose. 29, 8, p. 4269-4286 18 p.

Research output: Contribution to journal › Review article › peer-review

2 Scopus citations

Dosimetry and uncertainty approaches for the million person study of low-dose radiation health effects: overview of the recommendations in NCRP Report No. 178

Dauer, L. T., Bouville, A., Toohey, R. E., Boice, J. D., Beck, H. L., Eckerman, K. F., Hagemeyer, D., Leggett, R. W., Mumma, M. T., Napier, B., Pryor, K. H., Rosenstein, M., Schauer, D. A., Sherbini, S., Stram, D. O., Thompson, J. L., Till, J. E., Yoder, R. C. & Zeitlin, C., 2022, In: International Journal of Radiation Biology. 98, 4, p. 600-609 10 p.

Research output: Contribution to journal › Review article › peer-review

Open Access

13 Scopus citations

Environmental design of low-head run-of-river hydropower in the United States: A review of facility design models

Sasthav, C. & Oladosu, G., May 2022, In: Renewable and Sustainable Energy Reviews. 160, 112312.

Research output: Contribution to journal › Review article › peer-review

Open Access

18 Scopus citations

From legacy contamination to watershed systems science: a review of scientific insights and technologies developed through DOE-supported research in water and energy security

Dwivedi, D., Steefel, C. I., Arora, B., Banfield, J., Bargar, J., Boyanov, M. I., Brooks, S. C., Chen, X., Hubbard, S. S., Kaplan, D., Kemner, K. M., Nico, P. S., O'Loughlin, E. J., Pierce, E. M., Painter, S. L., Scheibe, T. D., Wainwright, H. M., Williams, K. H. & Zavarin, M., 2022, In: Environmental Research Letters. 17, 4, 043004.

Research output: Contribution to journal › Review article › peer-review

Open Access

17 Scopus citations

Frontiers and Opportunities in Bioenergy Crop Microbiome Research Networks

The Inter-BRC Microbiome Workshop Consortium, 2022, In: Phytobiomes Journal. 6, 2, p. 118-126 9 p.

Research output: Contribution to journal › Review article › peer-review

Open Access

4 Scopus citations

Microbial assimilation of lignin-derived aromatic compounds and conversion to value-added products

Azubuike, C. C., Allemann, M. N. & Michener, J. K., Feb 2022, In: Current Opinion in Microbiology. 65, p. 64-72 9 p.

Research output: Contribution to journal › Review article › peer-review

Open Access

35 Scopus citations

Opportunities and challenges for flow-through hydrothermal pretreatment in advanced biorefineries

Meng, X., Yoo, C. G., Pu, Y. & Ragauskas, A. J., Jan 2022, In: Bioresource Technology. 343, 126061.

Research output: Contribution to journal › Review article › peer-review

Open Access

16 Scopus citations

Overview of the MOSAiC expedition- Atmosphere

Shupe, M. D., Rex, M., Blomquist, B., G. Persson, P. O., Schmale, J., Uttal, T., Althausen, D., Angot, H., Archer, S., Bariteau, L., Beck, I., Bilberry, J., Bucci, S., Buck, C., Boyer, M., Brasseur, Z., Brooks, I. M., Calmer, R., Cassano, J. & Castro, V. & 94 others, Chu, D., Costa, D., Cox, C. J., Creamean, J., Crewell, S., Dahlke, S., Damm, E., de Boer, G., Deckelmann, H., Dethloff, K., Dütsch, M., Ebell, K., Ehrlich, A., Ellis, J., Engelmann, R., Fong, A. A., Frey, M. M., Gallagher, M. R., Ganzeveld, L., Gradinger, R., Graeser, J., Greenamyer, V., Griesche, H., Griffiths, S., Hamilton, J., Heinemann, G., Helmig, D., Herber, A., Heuzé, C., Hofer, J., Houchens, T., Howard, D., Inoue, J., Jacobi, H. W., Jaiser, R., Jokinen, T., Jourdan, O., Jozef, G., King, W., Kirchgaessner, A., Klingebiel, M., Krassovski, M., Krumpen, T., Lampert, A., Landing, W., Laurila, T., Lawrence, D., Lonardi, M., Loose, B., Lüpkes, C., Maahn, M., Macke, A., Maslowski, W., Marsay, C., Maturilli, M., Mech, M., Morris, S., Moser, M., Nicolaus, M., Ortega, P., Osborn, J., Pätzold, F., Perovich, D. K., Petäjä, T., Pilz, C., Pirazzini, R., Posman, K., Powers, H., Pratt, K. A., Preußer, A., Quéléver, L., Radenz, M., Rabe, B., Rinke, A., Sachs, T., Schulz, A., Siebert, H., Silva, T., Solomon, A., Sommerfeld, A., Spreen, G., Stephens, M., Stohl, A., Svensson, G., Uin, J., Viegas, J., Voigt, C., von der Gathen, P., Wehner, B., Welker, J. M., Wendisch, M., Werner, M., Xie, Z. Q. & Yue, F., Feb 7 2022, In: Elementa. 10, 1, 00060.

Research output: Contribution to journal › Review article › peer-review

Open Access

168 Scopus citations

Permafrost and Climate Change: Carbon Cycle Feedbacks From the Warming Arctic

Schuur, E. A. G., Abbott, B. W., Commane, R., Ernakovich, J., Euskirchen, E., Hugelius, G., Grosse, G., Jones, M., Koven, C., Leshyk, V., Lawrence, D., Loranty, M. M., Mauritz, M., Olefeldt, D., Natali, S., Rodenhizer, H., Salmon, V., Schädel, C., Strauss, J. & Treat, C. & 1 others, Turetsky, M., 2022, In: Annual Review of Environment and Resources. 47, p. 343-371 29 p.

Research output: Contribution to journal › Review article › peer-review

Open Access

126 Scopus citations

Plastic waste upcycling toward a circular economy

Zhao, X., Korey, M., Li, K., Copenhaver, K., Tekinalp, H., Celik, S., Kalaitzidou, K., Ruan, R., Ragauskas, A. J. & Ozcan, S., Jan 15 2022, In: Chemical Engineering Journal. 428, 131928.

Research output: Contribution to journal › Review article › peer-review

Open Access

237 Scopus citations

Biological and Environmental Systems Sci

Research output

Search results