Publications per year
Publications per year
- 1 - 50 out of 3,017 results
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2025
Agent-based modeling for multimodal transportation of CO2 for carbon capture, utilization, and storage: CCUS-agent
Uddin, M., Clark, R. J., Hilliard, M. R., Thompson, J. A., Langholtz, M. H. & Webb, E. G., Jan 15 2025, In: Applied Energy. 378, 124833.Research output: Contribution to journal › Article › peer-review
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Earth's record-high greenness and its attributions in 2020
Zhang, Y., Mao, J., Sun, G., Guo, Q., Atkins, J., Li, W., Jin, M., Song, C., Xiao, J., Hwang, T., Qiu, T., Meng, L., Ricciuto, D. M., Shi, X., Li, X., Thornton, P. & Hoffman, F., Jan 1 2025, In: Remote Sensing of Environment. 316, 114494.Research output: Contribution to journal › Article › peer-review
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Hydrokinetic energy applications within hydropower tailrace channels: Implications, siting, and U.S. potential
Tseng, C. Y. & Musa, M., Jan 2025, In: Renewable Energy. 238, 121916.Research output: Contribution to journal › Article › peer-review
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Integrating Intelligent Hydro-informatics into an effective Early Warning System for risk-informed urban flood management
Dang, T. Q., Tran, B. H., Le, Q. N., Tanim, A. H., Bui, V. H., Mai, S. T., Thanh, P. N. & Anh, D. T., Jan 2025, In: Environmental Modelling and Software. 183, 106246.Research output: Contribution to journal › Article › peer-review
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Streamlined fractionation for recovery of high-yield xylo-oligosaccharides, pure lignin and ethanol from poplar using short-chain organic acid/pentanol biphasic system
Liao, H., Meng, X., Pu, Y., Ragauskas, A. & Zhang, J., Jun 7 2025, In: Separation and Purification Technology. 358, 130221.Research output: Contribution to journal › Article › peer-review
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2024
Accurate Machine Learning for Predicting the Viscosities of Deep Eutectic Solvents
Mohan, M., Jetti, K. D., Smith, M. D., Demerdash, O. N., Kidder, M. K. & Smith, J. C., May 14 2024, In: Journal of Chemical Theory and Computation. 20, 9, p. 3911-3926 16 p.Research output: Contribution to journal › Article › peer-review
10 Scopus citations -
Activity assays of NnlA homologs suggest the natural product N-nitroglycine is degraded by diverse bacteria
Strickland, K. A., Rodriguez, B. M., Holland, A. A., Wagner, S., Luna-Alva, M., Graham, D. E. & Caranto, J. D., 2024, In: Beilstein Journal of Organic Chemistry. 20, p. 830-840 11 p.Research output: Contribution to journal › Article › peer-review
Open Access -
Adapting Feedstock Supply Chains for Regional Biorefineries
Cundiff, J., Grisso, B. & Webb, E., Mar 2024, Resource: Engineering and Technology for Sustainable World, 31, 2, p. 8-11 4 p.Research output: Contribution to specialist publication › Article
1 Scopus citations -
Advancing process-based flood frequency analysis for assessing flood hazard and population flood exposure
Perez, G., Coon, E. T., Rathore, S. S. & Le, P. V. V., Aug 2024, In: Journal of Hydrology. 639, 131620.Research output: Contribution to journal › Article › peer-review
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A Framework Using Applied Process Analysis Methods to Assess Water Security in the Vu Gia–Thu Bon River Basin, Vietnam
Dang, N. M., Vien, L. N., Tanim, A. H., Gagnon, A. S. & Anh, D. T., Jul 2024, In: Sustainability (Switzerland). 16, 13, 5749.Research output: Contribution to journal › Article › peer-review
Open Access -
Agent-based modeling to evaluate the effects of harvesting biomass and hunting on ring-necked pheasant (Phasianus colchicus) populations
Kreig, J. A. F., Lenhart, S., Ponce, E. & Jager, H. I., Jun 2024, In: Ecological Modelling. 492, 110705.Research output: Contribution to journal › Article › peer-review
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A global atlas of soil viruses reveals unexplored biodiversity and potential biogeochemical impacts
the Soil Virosphere Consortium, Jul 2024, In: Nature Microbiology. 9, 7, p. 1873-1883 11 p.Research output: Contribution to journal › Article › peer-review
Open Access3 Scopus citations -
A large net carbon loss attributed to anthropogenic and natural disturbances in the Amazon Arc of Deforestation
Csillik, O., Keller, M., Longo, M., Ferraz, A., Pinagé, E. R., Görgens, E. B., Ometto, J. P., Silgueiro, V., Brown, D., Duffy, P., Cushman, K. C. & Saatchi, S., Aug 13 2024, In: Proceedings of the National Academy of Sciences of the United States of America. 121, 33, e2310157121.Research output: Contribution to journal › Article › peer-review
Open Access1 Scopus citations -
A Mass-Conserving-Perceptron for Machine-Learning-Based Modeling of Geoscientific Systems
Wang, Y. H. & Gupta, H. V., Apr 2024, In: Water Resources Research. 60, 4, e2023WR036461.Research output: Contribution to journal › Article › peer-review
Open Access1 Scopus citations -
A mixture of grass–legume cover crop species may ameliorate water stress in a changing climate
Truong, N. Q., York, L. M., Decker, A. & Douglas, M. R., Jul 1 2024, In: AoB PLANTS. 16, 4, plae039.Research output: Contribution to journal › Article › peer-review
Open Access -
A multi-ancestry genetic study of pain intensity in 598,339 veterans
Million Veteran Program, Apr 2024, In: Nature medicine. 30, 4, p. 1075-1084 10 p.Research output: Contribution to journal › Article › peer-review
Open Access5 Scopus citations -
A Multi-Streamline Approach for Upcycling PET into a Biodiesel and Asphalt Modifier
Chen, K., Mraiza, Z., Pu, Y., Li, J., Liu, Z., Ragauskas, A. J., Zhou, F. & Yuan, J. S., Mar 2024, In: Polymers. 16, 6, 796.Research output: Contribution to journal › Article › peer-review
Open Access -
A multi-tissue genome-scale model of Populus trichocarpa elucidates overexpression targets for improving drought tolerance
Barbosa, J. S. C., Schroeder, W. L., Suthers, P. F., Jawdy, S. S., Chen, J. G., Muchero, W. & Maranas, C. D., 2024, In: In Silico Plants. 6, 1, diae007.Research output: Contribution to journal › Article › peer-review
Open Access -
Analyses of GWAS signal using GRIN identify additional genes contributing to suicidal behavior
International Suicide Genetics Consortium, VA Million Veteran Program & MVP Suicide Exemplar Workgroup, Dec 2024, In: Communications Biology. 7, 1, 1360.Research output: Contribution to journal › Article › peer-review
Open Access -
An integrated metagenomic, metabolomic and transcriptomic survey of Populus across genotypes and environments
Schadt, C., Martin, S., Carrell, A., Fortner, A., Hopp, D., Jacobson, D., Klingeman, D., Kristy, B., Phillips, J., Piatkowski, B., Miller, M. A., Smith, M., Patil, S., Flynn, M., Canon, S., Clum, A., Mungall, C. J., Pennacchio, C., Bowen, B. & Louie, K. & 7 others, , Dec 2024, In: Scientific Data. 11, 1, 339.Research output: Contribution to journal › Article › peer-review
Open Access2 Scopus citations -
Anoxia begets anoxia: A positive feedback to the deoxygenation of temperate lakes
Lewis, A. S. L., Lau, M. P., Jane, S. F., Rose, K. C., Be'eri-Shlevin, Y., Burnet, S. H., Clayer, F., Feuchtmayr, H., Grossart, H. P., Howard, D. W., Mariash, H., Delgado Martin, J., North, R. L., Oleksy, I., Pilla, R. M., Smagula, A. P., Sommaruga, R., Steiner, S. E., Verburg, P. & Wain, D. & 2 others, , Jan 2024, In: Global Change Biology. 30, 1, e17046.Research output: Contribution to journal › Article › peer-review
Open Access4 Scopus citations -
Antarctic Soils Select Copiotroph-Dominated Bacteria
Zhang, L., Zhao, X., Wang, J., He, L., Ren, C., Wang, J., Guo, Y., Wang, N. & Zhao, F., Aug 2024, In: Microorganisms. 12, 8, 1689.Research output: Contribution to journal › Article › peer-review
Open Access -
Ant handling changes myrmecochore seed coat microbiomes and alters diversity of seed-borne plant pathogenic fungi
Lash, C. L., Cregger, M. A., Kinkopf, A. M., Buerger, N., Klingeman, D. M. & Kwit, C., Apr 2024, In: Functional Ecology. 38, 4, p. 861-874 14 p.Research output: Contribution to journal › Article › peer-review
1 Scopus citations -
A phosphorylation-deficient ribosomal protein eS6 is largely functional in Arabidopsis thaliana, rescuing mutant defects from global translation and gene expression to photosynthesis and growth
Dasgupta, A., Urquidi Camacho, R. A., Enganti, R., Cho, S. K., Tucker, L. L., Torreverde, J. S., Abraham, P. E. & von Arnim, A. G., Jan 2024, In: Plant Direct. 8, 1, e566.Research output: Contribution to journal › Article › peer-review
Open Access2 Scopus citations -
A stream-aligned mixed polyhedral meshing strategy for integrated surface-subsurface hydrological models
Rathore, S. S., Coon, E. T. & Painter, S. L., Jun 2024, In: Computers and Geosciences. 188, 105617.Research output: Contribution to journal › Article › peer-review
Open Access2 Scopus citations -
AtDGCR14L contributes to salt-stress tolerance via regulating pre-mRNA splicing in Arabidopsis
Xie, M., Tadesse, D., Zhang, J., Yao, T., Zhang, L., Jawdy, S. S., Devireddy, A., Zheng, K., Smith, E. B., Morrell-Falvey, J., Pan, C., Chen, F., Tuskan, G. A., Muchero, W. & Chen, J. G., 2024, (Accepted/In press) In: Plant Journal.Research output: Contribution to journal › Article › peer-review
Open Access -
A US perspective on closing the carbon cycle to defossilize difficult-to-electrify segments of our economy
Shaw, W. J., Kidder, M. K., Bare, S. R., Delferro, M., Morris, J. R., Toma, F. M., Senanayake, S. D., Autrey, T., Biddinger, E. J., Boettcher, S., Bowden, M. E., Britt, P. F., Brown, R. C., Bullock, R. M., Chen, J. G., Daniel, C., Dorhout, P. K., Efroymson, R. A., Gaffney, K. J. & Gagliardi, L. & 44 others, , May 2024, In: Nature Reviews Chemistry. 8, 5, p. 376-400 25 p.Research output: Contribution to journal › Article › peer-review
Open Access6 Scopus citations -
Bacterial hemophilin homologs and their specific type eleven secretor proteins have conserved roles in heme capture and are diversifying as a family
Grossman, A. S., Gell, D. A., Wu, D. G., Carper, D. L., Hettich, R. L. & Goodrich-Blair, H., Jun 2024, In: Journal of Bacteriology. 206, 6Research output: Contribution to journal › Article › peer-review
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Bayes_Opt-SWMM: A Gaussian process-based Bayesian optimization tool for real-time flood modeling with SWMM
Tanim, A. H., Smith-Lewis, C., Downey, A. R. J., Imran, J. & Goharian, E., Aug 2024, In: Environmental Modelling and Software. 179, 106122.Research output: Contribution to journal › Article › peer-review
1 Scopus citations -
Biochar-compost-based controlled-release nitrogen fertilizer intended for an active microbial community
Rubel, R. I., Wei, L., Alanazi, S., Aldekhail, A., Cidreira, A. C. M., Yang, X., Wasti, S., Bhagia, S. & Zhao, X., 2024, In: Frontiers of Agricultural Science and Engineering. 11, 2, p. 326-343 18 p.Research output: Contribution to journal › Article › peer-review
Open Access -
Bioelectrochemical reactor to manage anthropogenic sulfate pollution for freshwater ecosystems: Mathematical modeling and experimental validation
Berens, M. J., Deen, T. W. & Chun, C. L., Jun 2024, In: Chemosphere. 357, 142054.Research output: Contribution to journal › Article › peer-review
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Biosensors for the detection of chorismate and cis,cis-muconic acid in Corynebacterium glutamicum
Velasquez-Guzman, J. C., Huttanus, H. M., Morales, D. P., Werner, T. S., Carroll, A. L., Guss, A. M., Yeager, C. M., Dale, T. & Jha, R. K., 2024, In: Journal of Industrial Microbiology and Biotechnology. 51, kuae024.Research output: Contribution to journal › Article › peer-review
Open Access -
Borg extrachromosomal elements of methane-oxidizing archaea have conserved and expressed genetic repertoires
Schoelmerich, M. C., Ly, L., West-Roberts, J., Shi, L. D., Shen, C., Malvankar, N. S., Taib, N., Gribaldo, S., Woodcroft, B. J., Schadt, C. W., Al-Shayeb, B., Dai, X., Mozsary, C., Hickey, S., He, C., Beaulaurier, J., Juul, S., Sachdeva, R. & Banfield, J. F., Dec 2024, In: Nature Communications. 15, 1, 5414.Research output: Contribution to journal › Article › peer-review
Open Access1 Scopus citations -
Building an Adverse Outcome Pathway network for COVID-19
Nymark, P., Clerbaux, L. A., Amorim, M. J., Andronis, C., de Bernardi, F., Bezemer, G. F. G., Coecke, S., Gavins, F. N. E., Jacobson, D., Lekka, E., Margiotta-Casaluci, L., Martens, M., Mayasich, S. A., Mortensen, H. M., Kim, Y. J., Sachana, M., Tanabe, S., Virvilis, V., Edwards, S. W. & Halappanavar, S., 2024, In: Frontiers in Systems Biology. 4, 1384481.Research output: Contribution to journal › Article › peer-review
Open Access -
Carbon-phosphorus cycle models overestimate CO2enrichment response in a mature Eucalyptus forest
Jiang, M., Medlyn, B. E., Wårlind, D., Knauer, J., Fleischer, K., Goll, D. S., Olin, S., Yang, X., Yu, L., Zaehle, S., Zhang, H., Lv, H., Crous, K. Y., Carrillo, Y., Macdonald, C., Anderson, I., Boer, M. M., Farrell, M., Gherlenda, A. & Castañeda-Gómez, L. & 13 others, , Jul 2024, In: Science Advances. 10, 27, adl5822.Research output: Contribution to journal › Article › peer-review
2 Scopus citations -
Catabolism of β-5 linked aromatics by Novosphingobium aromaticivorans
Metz, F., Olsen, A. M., Lu, F., Myers, K. S., Allemann, M. N., Michener, J. K., Noguera, D. R. & Donohue, T. J., Aug 14 2024, In: mBio. 15, 8, p. e0171824Research output: Contribution to journal › Article › peer-review
Open Access1 Scopus citations -
Characterization of the acoustic cavitation in ionic liquids in a horn-type ultrasound reactor
Schieppati, D., Mohan, M., Blais, B., Fattahi, K., Patience, G. S., Simmons, B. A., Singh, S. & Boffito, D. C., Jan 2024, In: Ultrasonics Sonochemistry. 102, 106721.Research output: Contribution to journal › Article › peer-review
Open Access7 Scopus citations -
Characterization of the In Vivo Deuteration of Native Phospholipids by Mass Spectrometry Yields Guidelines for Their Regiospecific Customization
Keller, M. J., Zhang, Q., Qian, S., Sanders, B. C., O’Neill, H. M. & Hettich, R. L., Jan 9 2024, In: Analytical Chemistry. 96, 1, p. 212-219 8 p.Research output: Contribution to journal › Article › peer-review
1 Scopus citations -
Climate-driven shifts in freshwater biodiversity will impact mitigation costs for hydropower
Yoon, H. S., Corsi, F., Miara, A., Welch, J. R. & Jager, H. I., Dec 1 2024, In: Science of the Total Environment. 954, 176201.Research output: Contribution to journal › Article › peer-review
Open Access -
Clostridium autoethanogenum alters cofactor synthesis, redox metabolism, and lysine-acetylation in response to elevated H2:CO feedstock ratios for enhancing carbon capture efficiency
Davin, M. E., Thompson, R. A., Giannone, R. J., Mendelson, L. W., Carper, D. L., Martin, M. Z., Martin, M. E., Engle, N. L., Tschaplinski, T. J., Brown, S. D. & Hettich, R. L., Dec 2024, In: Biotechnology for Biofuels and Bioproducts. 17, 1, 119.Research output: Contribution to journal › Article › peer-review
Open Access1 Scopus citations -
Combined effects of polyamide microplastic and sulfamethoxazole in modulating the growth and transcriptome profile of hydroponically grown rice (Oryza sativa L.)
Ullah, R., Farias, J., Feyissa, B. A., Tsui, M. T. K., Chow, A., Williams, C., Karanfil, T. & Ligaba-Osena, A., Nov 20 2024, In: Science of the Total Environment. 952, 175909.Research output: Contribution to journal › Article › peer-review
Open Access -
Comparison of Eco-Friendly Ionic Liquids and Commercial Bio-Derived Lubricant Additives in Terms of Tribological Performance and Aquatic Toxicity
He, X., Stevenson, L. M., Kumara, C., Mathews, T. J., Luo, H. & Qu, J., Aug 2024, In: Molecules. 29, 16, 3851.Research output: Contribution to journal › Article › peer-review
Open Access1 Scopus citations -
Comparison of machine learning and electrical resistivity arrays to inverse modeling for locating and characterizing subsurface targets
Jamil, A., Rucker, D. F., Lu, D., Brooks, S. C., Tartakovsky, A. M., Cao, H. & Carroll, K. C., Oct 2024, In: Journal of Applied Geophysics. 229, 105493.Research output: Contribution to journal › Article › peer-review
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Comparison of microbial strains as candidate hosts and genetic reservoirs for the valorization of lignin streams
Wilkes, R. A., Borchert, A. J., Garcia, V. E., Geiselman, G. M., Liu, S., Guss, A. M., Michener, J. K., Noguera, D. R., Masai, E., Gladden, J. M., Ralph, J. & Beckham, G. T., 2024, (Accepted/In press) In: Green Chemistry.Research output: Contribution to journal › Article › peer-review
Open Access -
Complete genome of Pseudomonas putida strain WBB028 isolated from leaf litter
Pelletier, D. A., Alexander, W., Burdick, L. H., Rush, T. A., Tannous, J., Webb, A. B. & Morrell-Falvey, J. L., Jun 2024, In: Microbiology Resource Announcements. 13, 6Research output: Contribution to journal › Article › peer-review
Open Access -
Complete genome sequence of Luteolibacter sp. strain Populi, a member of phylum Verrucomicrobiota isolated from the Populus trichocarpa rhizosphere
Imai, S., Allen, B., Hochanadel, L. H., Alexander, W. G., Cottingham, R. W., Schadt, C. W., Pelletier, D. A. & Podar, M., Sep 2024, In: Microbiology Resource Announcements. 13, 9Research output: Contribution to journal › Article › peer-review
Open Access -
Compound Flooding in Halmstad: Common Causes, Interannual Variability and the Effects of Climate Change
Hieronymus, M., Berg, P., Ashraf, F. B. & Barquet, K., 2024, In: Tellus, Series A: Dynamic Meteorology and Oceanography. 76, 1, p. 148-165 18 p.Research output: Contribution to journal › Article › peer-review
Open Access -
Concurrent Measurement of O2 Production and Isoprene Emission During Photosynthesis: Pros, Cons and Metabolic Implications of Responses to Light, CO2 and Temperature
Jardine, K. J., Som, S., Gallo, L. B., Demus, J., Domingues, T. F., Wistrom, C. M., Gu, L., Tcherkez, G. & Niinemets, Ü., 2024, (Accepted/In press) In: Plant Cell and Environment.Research output: Contribution to journal › Article › peer-review
Open Access -
Consistent time allocation fraction to vegetation green-up versus senescence across northern ecosystems despite recent climate change
Meng, F., Felton, A. J., Mao, J., Cong, N., Smith, W. K., Körner, C., Hu, Z., Hong, S., Knott, J., Yan, Y., Guo, B., Deng, Y., Leisz, S., Dorji, T., Wang, S. & Chen, A., Jun 2024, In: Science Advances. 10, 23, eadn2487.Research output: Contribution to journal › Article › peer-review
Open Access1 Scopus citations -
Contribution of Microorganisms with the Clade II Nitrous Oxide Reductase to Suppression of Surface Emissions of Nitrous Oxide
Hunt, K. A., Carr, A. V., Otwell, A. E., Valenzuela, J. J., Walker, K. S., Dixon, E. R., Lui, L. M., Nielsen, T. N., Bowman, S., von Netzer, F., Moon, J. W., Schadt, C. W., Rodriguez, M., Lowe, K., Joyner, D., Davis, K. J., Wu, X., Chakraborty, R., Fields, M. W. & Zhou, J. & 5 others, , Apr 23 2024, In: Environmental Science and Technology. 58, 16, p. 7056-7065 10 p.Research output: Contribution to journal › Article › peer-review